RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 STIM2Q9P246 746 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 TMEM59LQ9UK28 342 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 FBXO4Q9UKT5 387 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 TRIOO75962 3097 aa14.26□□□□□ -0.13
USF1-205ENST00000473969 A0A0A0MRY4 1105 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 SIGLEC16A6NMB1 481 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 CHURC1-FNTBB4DL54 471 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 K7EQS6 105 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 DDX3XO00571 662 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■■□□ 18
USF1-205ENST00000473969 FTLP02792 175 aaPredicted RBP14.25□□□□□ -0.13
USF1-205ENST00000473969 TACR2P21452 398 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 TIE1P35590 1138 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 NRLP54845 237 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 ATP11AP98196 1134 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 ARL13BQ3SXY8 428 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 C2orf27AQ580R0 203 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 FAM133BQ5BKY9 247 aaKnown RBP14.25□□□□□ -0.13
USF1-205ENST00000473969 RABGAP1LQ5R372 815 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 ACBD5Q5T8D3 534 aaPredicted RBP14.25□□□□□ -0.13
USF1-205ENST00000473969 PIK3R6Q5UE93 754 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 E4F1Q66K89 784 aaPredicted RBP14.25□□□□□ -0.13
USF1-205ENST00000473969 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 TMC6Q7Z403 805 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 CNGA4Q8IV77 575 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 LGI2Q8N0V4 545 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 EMC1Q8N766 993 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 SYT11Q9BT88 431 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 TKTL2Q9H0I9 626 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 TAS2R14Q9NYV8 317 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 ADAMTS1Q9UHI8 967 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 MIA3Q5JRA6 1907 aa14.25□□□□□ -0.13
USF1-205ENST00000473969 MYBL1P10243 752 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 GPD1P21695 349 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 RRM1P23921 792 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 CXCR3P49682 368 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 TCF15Q12870 199 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 EIF4EBP2Q13542 120 aaPredicted RBP14.24□□□□□ -0.13
USF1-205ENST00000473969 CDH18Q13634 790 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 GAS6Q14393 721 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 CDO1Q16878 200 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 HSF5Q4G112 596 aaPredicted RBP14.24□□□□□ -0.13
USF1-205ENST00000473969 MS4A13Q5J8X5 152 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 ZC3H14Q6PJT7 736 aaKnown RBP14.24□□□□□ -0.13
USF1-205ENST00000473969 LRRC31Q6UY01 552 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 ANKS1BQ7Z6G8 1248 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 MFN1Q8IWA4 741 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 CARNMT1Q8N4J0 409 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 KCNV2Q8TDN2 545 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 USP33Q8TEY7 942 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 NT5C3BQ969T7 300 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 FAM122AQ96E09 287 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 MCEEQ96PE7 176 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 SIK2Q9H0K1 926 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 MRPL47Q9HD33 250 aaKnown RBP14.24□□□□□ -0.13
USF1-205ENST00000473969 PIGVQ9NUD9 493 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 FBXO10Q9UK96 956 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 SLC27A6Q9Y2P4 619 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 SCINQ9Y6U3 715 aa14.24□□□□□ -0.13
USF1-205ENST00000473969 C2CD4BA6NLJ0 364 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 AKR1B15C9JRZ8 316 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 H0Y626 953 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 TRIM24O15164 1050 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 ZBTB24O43167 697 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 TIMM44O43615 452 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 GJB6O95452 261 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 CISD3P0C7P0 127 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 SP9P0CG40 484 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 HOXD9P28356 352 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 SLC6A4P31645 630 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 RFC1P35251 1148 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 PTPN9P43378 593 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 SATB1Q01826 763 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 ZNF528Q3MIS6 628 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 CCDC14Q49A88 953 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 EOGTQ5NDL2 527 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 TTC39BQ5VTQ0 682 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 HGSNATQ68CP4 663 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 NADSYN1Q6IA69 706 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 WDR59Q6PJI9 974 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 ZNF513Q8N8E2 541 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 JOSD2Q8TAC2 188 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 WFIKKN2Q8TEU8 576 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 ZNF653Q96CK0 615 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 RPRD1AQ96P16 312 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 FAM126AQ9BYI3 521 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 PRMT8Q9NR22 394 aaPredicted RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 CNOT8Q9UFF9 292 aaKnown RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 XPO7Q9UIA9 1087 aaKnown RBP14.23□□□□□ -0.13
USF1-205ENST00000473969 KMT2EQ8IZD2 1858 aa14.23□□□□□ -0.13
USF1-205ENST00000473969 MFAP3LO75121 409 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 PAGE1O75459 146 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 MOCS3O95396 460 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 KLF8O95600 359 aaPredicted RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 ADCY5O95622 1261 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 TFE3P19532 575 aaPredicted RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 HNRNPH3P31942 346 aaKnown RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 ADKP55263 362 aaKnown RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 OXCT1P55809 520 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms