RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 GDF3Q9NR23 364 aa19.88■□□□□ 0.77
SORT1-203ENST00000471996 CLCA2Q9UQC9 943 aa19.88■□□□□ 0.77
SORT1-203ENST00000471996 NCKAP1Q9Y2A7 1128 aa19.88■□□□□ 0.77
SORT1-203ENST00000471996 UBE4BO95155 1302 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 FAM47DPA6NHR8 397 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 LRRIQ3A6PVS8 624 aaPredicted RBP19.87■□□□□ 0.77
SORT1-203ENST00000471996 CKMT2P17540 419 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 TRIM21P19474 475 aaKnown RBP19.87■□□□□ 0.77
SORT1-203ENST00000471996 CD38P28907 300 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 SGSM1Q2NKQ1 1148 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 MPPE1Q53F39 396 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 FAM26FQ5R3K3 315 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 USP30Q70CQ3 517 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 CHST9Q7L1S5 443 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 ADIPOR2Q86V24 386 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 C12orf56Q8IXR9 622 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 DCBLD1Q8N8Z6 715 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 ZNF248Q8NDW4 579 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 PARD3BQ8TEW8 1205 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 SEMA4CQ9C0C4 833 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 LRRC27Q9C0I9 530 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 SUN2Q9UH99 717 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 SCML1Q9UN30 329 aa19.87■□□□□ 0.77
SORT1-203ENST00000471996 EXOC3O60645 756 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 ARRB1P49407 418 aaPredicted RBP19.86■□□□□ 0.77
SORT1-203ENST00000471996 GALCP54803 685 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 TMPRSS3P57727 454 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 KIAA0907Q7Z7F0 614 aaPredicted RBP19.86■□□□□ 0.77
SORT1-203ENST00000471996 PDILTQ8N807 584 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.86■□□□□ 0.77
SORT1-203ENST00000471996 TWNKQ96RR1 684 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 PABPC3Q9H361 631 aaKnown RBP19.86■□□□□ 0.77
SORT1-203ENST00000471996 AASDHPPTQ9NRN7 309 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 MARCH2Q9P0N8 246 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 CGNQ9P2M7 1197 aaKnown RBP19.86■□□□□ 0.77
SORT1-203ENST00000471996 STRIP2Q9ULQ0 834 aa19.86■□□□□ 0.77
SORT1-203ENST00000471996 MYH10P35580 1976 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 A0A1W2PR77 199 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 SLC12A8A0AV02 714 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 PYCARD-AS1I3L0S3 204 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 RPN1P04843 607 aaKnown RBP19.85■□□□□ 0.77
SORT1-203ENST00000471996 DLDP09622 509 aaKnown RBP19.85■□□□□ 0.77
SORT1-203ENST00000471996 C6P13671 934 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 ASPAP45381 313 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 UCNP55089 124 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 INSM1Q01101 510 aaPredicted RBP19.85■□□□□ 0.77
SORT1-203ENST00000471996 BNIP3Q12983 259 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 RABEP1Q15276 862 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 SFMBT2Q5VUG0 894 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 BROXQ5VW32 411 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 NCEH1Q6PIU2 408 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 AHI1Q8N157 1196 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 GANCQ8TET4 914 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 TAF4BQ92750 862 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 PLD4Q96BZ4 506 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 ARID3AQ99856 593 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 RSPH9Q9H1X1 276 aaPredicted RBP19.85■□□□□ 0.77
SORT1-203ENST00000471996 ABCB8Q9NUT2 735 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 KBTBD4Q9NVX7 518 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 FBXL12Q9NXK8 326 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 GGA2Q9UJY4 613 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 HECTD1Q9ULT8 2610 aa19.85■□□□□ 0.77
SORT1-203ENST00000471996 WNT9AO14904 365 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 PABPC1P11940 636 aaKnown RBP19.84■□□□□ 0.77
SORT1-203ENST00000471996 RXRGP48443 463 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 PCBP4P57723 403 aaKnown RBP19.84■□□□□ 0.77
SORT1-203ENST00000471996 ASIC1P78348 528 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 INCA1Q0VD86 236 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 ARHGAP40Q5TG30 622 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 MBLAC2Q68D91 279 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 RSRC2Q7L4I2 434 aaKnown RBP19.84■□□□□ 0.77
SORT1-203ENST00000471996 ZC3H3Q8IXZ2 948 aaKnown RBP19.84■□□□□ 0.77
SORT1-203ENST00000471996 NAF1Q96HR8 494 aaKnown RBP19.84■□□□□ 0.77
SORT1-203ENST00000471996 HIC2Q96JB3 615 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 ZNF578Q96N58 590 aaPredicted RBP19.84■□□□□ 0.77
SORT1-203ENST00000471996 NT5C1AQ9BXI3 368 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 DUSP16Q9BY84 665 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 ERVMER34-1Q9H9K5 563 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 CPNE5Q9HCH3 593 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 SERGEFQ9UGK8 458 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 ADAMTS1Q9UHI8 967 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 COL6A6A6NMZ7 2263 aa19.84■□□□□ 0.77
SORT1-203ENST00000471996 LRRC72A6NJI9 287 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 C10orf142B7Z368 130 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 KIF20AO95235 890 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 WISP1O95388 367 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 ASS1P00966 412 aaKnown RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 ATP5BP06576 529 aaKnown RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 ACP1P24666 158 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 NXPH1P58417 271 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 ZNF445P59923 1031 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 CEBPZQ03701 1054 aaKnown RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 SFSWAPQ12872 951 aaKnown RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 LY6DQ14210 128 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 KCNJ12Q14500 433 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 TRIP4Q15650 581 aaPredicted RBP19.83■□□□□ 0.77
SORT1-203ENST00000471996 ZACNQ401N2 412 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 SPOPLQ6IQ16 392 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 CNNM4Q6P4Q7 775 aa19.83■□□□□ 0.77
SORT1-203ENST00000471996 KANSL1Q7Z3B3 1105 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms