RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 RPL34P49207 117 aaKnown RBP13.02□□□□□ -0.33
CCNL1-213ENST00000471044 MFAP3P55082 362 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 MEA1Q16626 185 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 EGFLAMQ63HQ2 1017 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 PMS2CLQ68D20 193 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 TREML4Q6UXN2 200 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 TSC1Q92574 1164 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 EDEM1Q92611 657 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 UBE2TQ9NPD8 197 aaPredicted RBP13.02□□□□□ -0.33
CCNL1-213ENST00000471044 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
CCNL1-213ENST00000471044 INVSQ9Y283 1065 aa13.02□□□□□ -0.33
CCNL1-213ENST00000471044 TCRBV21S2A2A0A5A6 115 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 GTPBP10A4D1E9 387 aaKnown RBP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 GFRA2O00451 464 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 SLC30A4O14863 429 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 MED7O43513 233 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 FBXO21O94952 628 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 LTFP02788 710 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 CYBBP04839 570 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 SNRPBP14678 240 aaKnown RBP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 SLC9A1P19634 815 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 BCKDHBP21953 392 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 GBP1P32455 592 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 ACADSBP45954 432 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 HARS2P49590 506 aaKnown RBP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 BYSLQ13895 437 aaKnown RBP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 TPD52L1Q16890 204 aaPredicted RBP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 SDE2Q6IQ49 451 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 GBP6Q6ZN66 633 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 CREBRFQ8IUR6 639 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 CLEC4CQ8WTT0 213 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 BHMTQ93088 406 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 PIWIL1Q96J94 861 aaKnown RBP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 ACOX2Q99424 681 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 GABRG3Q99928 467 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 CRACR2AQ9BSW2 395 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 SLC2A11Q9BYW1 496 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 NUP62CLQ9H1M0 184 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 THAP9Q9H5L6 903 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 CD248Q9HCU0 757 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 BCCIPQ9P287 314 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCNL1-213ENST00000471044 STOML2Q9UJZ1 356 aa13.01□□□□□ -0.33
CCNL1-213ENST00000471044 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 A0A1W2PQF6 199 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 PIK3R2O00459 728 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 KRT5P13647 590 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 GABRG2P18507 467 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 WASP42768 502 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 MTIF2P46199 727 aaKnown RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 LIMK1P53667 647 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 ZNF445P59923 1031 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 SF3A2Q15428 464 aaKnown RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 CCDC6Q16204 474 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 EXOC3L4Q17RC7 722 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 MAP7D1Q3KQU3 841 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 AASDHQ4L235 1098 aaPredicted RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 MPPE1Q53F39 396 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 LCE2AQ5TA79 106 aaPredicted RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 GJB7Q6PEY0 223 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 CHPFQ8IZ52 775 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 PGBD3Q8N328 593 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 C12orf50Q8NA57 414 aaPredicted RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 IPO4Q8TEX9 1081 aaKnown RBP13□□□□□ -0.33
CCNL1-213ENST00000471044 DDI1Q8WTU0 396 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 STK32AQ8WU08 396 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 HMGB4Q8WW32 186 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 ZNF606Q8WXB4 792 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 RLN3Q8WXF3 142 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 GOLGA1Q92805 767 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 SPACA7Q96KW9 195 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 VPS45Q9NRW7 570 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 APEX2Q9UBZ4 518 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 ADAMTS9Q9P2N4 1935 aa13□□□□□ -0.33
CCNL1-213ENST00000471044 ZZEF1O43149 2961 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 MUC22E2RYF6 1773 aaPredicted RBP12.99□□□□□ -0.33
CCNL1-213ENST00000471044 BECN2A8MW95 431 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 NPC1O15118 1278 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
CCNL1-213ENST00000471044 MSI1O43347 362 aaKnown RBP12.99□□□□□ -0.33
CCNL1-213ENST00000471044 THAP12O43422 761 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 LETM1O95202 739 aaPredicted RBP12.99□□□□□ -0.33
CCNL1-213ENST00000471044 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 PON1P27169 355 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 ERCC5P28715 1186 aaPredicted RBP12.99□□□□□ -0.33
CCNL1-213ENST00000471044 GNA15P30679 374 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 CREB5Q02930 508 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 MAN2A1Q16706 1144 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 GEN1Q17RS7 908 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 DPCR1Q3MIW9 517 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 ADGRF1Q5T601 910 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 DENND1BQ6P3S1 775 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 BEND5Q7L4P6 421 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 ANKS1BQ7Z6G8 1248 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 FAM114A1Q8IWE2 563 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 UNC45BQ8IWX7 931 aa12.99□□□□□ -0.33
CCNL1-213ENST00000471044 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms