RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ADORA2BP29275 332 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 CPT1AP50416 773 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 AIF1P55008 147 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 YWHAZP63104 245 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 ZBTB16Q05516 673 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 MPP2Q14168 576 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 PDK1Q15118 436 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TAF5Q15542 800 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 DBN1Q16643 649 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 PARP6Q2NL67 630 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RNFT1Q5M7Z0 435 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TMEM63BQ5T3F8 832 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 GJC2Q5T442 439 aaPredicted RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 ANKRD20A3Q5VUR7 823 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 PMF1Q6P1K2 205 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 NPNTQ6UXI9 565 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 ECHDC2Q86YB7 292 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 ADGRF2Q8IZF7 708 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 SIX6OS1Q8N1H7 587 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 CRYBG2Q8N1P7 616 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 NME8Q8N427 588 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TOP6BLQ8N6T0 577 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 PPM1NQ8N819 430 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 BANPQ8N9N5 519 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 GSDMBQ8TAX9 411 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RAB3IL1Q8TBN0 382 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TCP10LQ8TDR4 215 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 DEPDC1BQ8WUY9 529 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 SLC35F5Q8WV83 523 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TFB1MQ8WVM0 346 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 GTPBP3Q969Y2 492 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 FAM149B1Q96BN6 582 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RSRC1Q96IZ7 334 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 QKIQ96PU8 341 aaKnown RBP eCLIP8.26□□□□□ -1.097e-7■■■■■ 232.7
SMC4-212ENST00000470240 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 OSMRQ99650 979 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 MRPL45Q9BRJ2 306 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 MED10Q9BTT4 135 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TRIM62Q9BVG3 475 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 APOL6Q9BWW8 343 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 SAR1AQ9NR31 198 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 SETD4Q9NVD3 440 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 GDAP2Q9NXN4 497 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 NOP53Q9NZM5 478 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 TXNDC16Q9P2K2 825 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 STK38LQ9Y2H1 464 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RAD54BQ9Y620 910 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 MAD1L1Q9Y6D9 718 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 TEX264Q9Y6I9 313 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 SF3B1O75533 1304 aaKnown RBP eCLIP8.26□□□□□ -1.097e-33■■■■■ 320.9
SMC4-212ENST00000470240 A0A1W2PPM1 405 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 TMEM229AB2RXF0 380 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 DYNC1LI2O43237 492 aaPredicted RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 PAPSS1O43252 624 aaPredicted RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 MTSS1O43312 755 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 OPHN1O60890 802 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 BANF1O75531 89 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 HAUS5O94927 633 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 TGDSO95455 350 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 SNAI1O95863 264 aaPredicted RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 F2P00734 622 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 LMNAP02545 664 aaKnown RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 MLNP12872 115 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 ADRA1DP25100 572 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 GARSP41250 739 aaKnown RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 MATKP42679 507 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 SULT1E1P49888 294 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 ZNF135P52742 658 aaPredicted RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 ARFIP2P53365 341 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 HDAC4P56524 1084 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 EFTUD2Q15029 972 aaKnown RBP eCLIP8.25□□□□□ -1.097e-8■■□□□ 11.8
SMC4-212ENST00000470240 SLC1A5Q15758 541 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 SPRED3Q2MJR0 410 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 PREPLQ4J6C6 727 aaPredicted RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 DLK2Q6UY11 383 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 NLRP9Q7RTR0 991 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 RSPH3Q86UC2 560 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 TTC30AQ86WT1 665 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 FITM2Q8N6M3 262 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 PQLC3Q8N755 202 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 C12orf29Q8N999 325 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 PCDH19Q8TAB3 1148 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 PPP1R14CQ8TAE6 165 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 FBXO41Q8TF61 875 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 C10orf82Q8WW14 230 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 TTC17Q96AE7 1141 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 STAMBPL1Q96FJ0 436 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 RMDN2Q96LZ7 410 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 ANKRD27Q96NW4 1050 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 TMEM237Q96Q45 408 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 SIKE1Q9BRV8 207 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 MYLK2Q9H1R3 596 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 LRMDAQ9H2I8 198 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 ADAMTS10Q9H324 1103 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 FAM96AQ9H5X1 160 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 C10orf88Q9H8K7 445 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 KIF9Q9HAQ2 790 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 CD248Q9HCU0 757 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms