RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 PLA2G4CQ9UP65 541 aa18.22■□□□□ 0.51
COL7A1-208ENST00000470076 A0A1B0GTW7 788 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 BICDL2A1A5D9 508 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 C1QTNF9BB2RNN3 333 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 M0QYV0 167 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 RNF225M0QZC1 329 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-208ENST00000470076 GABBR2O75899 941 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 FBXO21O94952 628 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 TOP3BO95985 862 aaKnown RBP18.21■□□□□ 0.51
COL7A1-208ENST00000470076 IGLV3-27P01718 113 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 LTFP02788 710 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 C1QTNF9P0C862 333 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 CD59P13987 128 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 SPINK2P20155 84 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 MAOBP27338 520 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 SLC11A2P49281 568 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 GCNT1Q02742 428 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 RING1Q06587 406 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 CAMK2GQ13555 558 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-208ENST00000470076 MPP7Q5T2T1 576 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 NUGGCQ68CJ6 796 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 KLHL10Q6JEL2 608 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 CHST9Q7L1S5 443 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 KIAA0907Q7Z7F0 614 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-208ENST00000470076 AHI1Q8N157 1196 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 ZNF557Q8N988 423 aaPredicted RBP18.21■□□□□ 0.51
COL7A1-208ENST00000470076 OR2I1PQ8NGU4 316 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 OR2T3Q8NH03 318 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 KAT5Q92993 513 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 ZSWIM1Q9BR11 485 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 PCED1AQ9H1Q7 454 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 TMEM245Q9H330 911 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 ABCB8Q9NUT2 735 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 GGA2Q9UJY4 613 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
COL7A1-208ENST00000470076 ZZEF1O43149 2961 aa18.21■□□□□ 0.5
COL7A1-208ENST00000470076 ASPMQ8IZT6 3477 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 SPAARA0A1B0GVQ0 90 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 METTL12A8MUP2 240 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 H0Y626 953 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 IRAK2O43187 625 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 GJB3O75712 270 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 TRIM16O95361 564 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 C7P10643 843 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 PABPC1P11940 636 aaKnown RBP18.2■□□□□ 0.5
COL7A1-208ENST00000470076 BRD2P25440 801 aaKnown RBP18.2■□□□□ 0.5
COL7A1-208ENST00000470076 RDXP35241 583 aaKnown RBP18.2■□□□□ 0.5
COL7A1-208ENST00000470076 FNDC3BQ53EP0 1204 aaKnown RBP18.2■□□□□ 0.5
COL7A1-208ENST00000470076 ADIPOR2Q86V24 386 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 NELFBQ8WX92 580 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 AZIN2Q96A70 460 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 TMEM121BQ9BXQ6 578 aaPredicted RBP18.2■□□□□ 0.5
COL7A1-208ENST00000470076 FBRSQ9HAH7 460 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 NEUROG3Q9Y4Z2 214 aa18.2■□□□□ 0.5
COL7A1-208ENST00000470076 MUC22E2RYF6 1773 aaPredicted RBP18.19■□□□□ 0.5
COL7A1-208ENST00000470076 ZFHX4Q86UP3 3567 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 TMEM8BA6NDV4 472 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 PIK3R2O00459 728 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 GNA14O95837 355 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 ATP5BP06576 529 aaKnown RBP18.19■□□□□ 0.5
COL7A1-208ENST00000470076 DLDP09622 509 aaKnown RBP18.19■□□□□ 0.5
COL7A1-208ENST00000470076 HLA-EP13747 358 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 TBX4P57082 545 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 GRIK2Q13002 908 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 PIK3R6Q5UE93 754 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 RRAGAQ7L523 313 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 CACUL1Q86Y37 369 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 TRIM59Q8IWR1 403 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 ZCCHC9Q8N567 271 aaKnown RBP18.19■□□□□ 0.5
COL7A1-208ENST00000470076 KDF1Q8NAX2 398 aaPredicted RBP18.19■□□□□ 0.5
COL7A1-208ENST00000470076 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 CYB5D2Q8WUJ1 264 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 DDX50Q9BQ39 737 aaKnown RBP18.19■□□□□ 0.5
COL7A1-208ENST00000470076 MIR1-1HGQ9H1L0 117 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 LHX5Q9H2C1 402 aa18.19■□□□□ 0.5
COL7A1-208ENST00000470076 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
COL7A1-208ENST00000470076 HYAL3O43820 417 aaPredicted RBP18.18■□□□□ 0.5
COL7A1-208ENST00000470076 ACSL4O60488 711 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 TBL1XO60907 577 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 BMP6P22004 513 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 SGSHP51688 502 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 MARSP56192 900 aaKnown RBP18.18■□□□□ 0.5
COL7A1-208ENST00000470076 ZBTB16Q05516 673 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 KCNH2Q12809 1159 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 MORC3Q14149 939 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 NUMA1Q14980 2115 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 PTPRNQ16849 979 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 FAM133BQ5BKY9 247 aaKnown RBP18.18■□□□□ 0.5
COL7A1-208ENST00000470076 MBLAC2Q68D91 279 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 RFWD3Q6PCD5 774 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 ARHGEF19Q8IW93 802 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 CLEC4CQ8WTT0 213 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 GATA6Q92908 595 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 KNL1Q8NG31 2342 aa18.18■□□□□ 0.5
COL7A1-208ENST00000470076 FAM208BQ5VWN6 2430 aa18.17■□□□□ 0.5
COL7A1-208ENST00000470076 TYW5A2RUC4 315 aaKnown RBP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 BCAT2O15382 392 aaPredicted RBP18.17■□□□□ 0.5
COL7A1-208ENST00000470076 AFPP02771 609 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms