RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GJC2Q5T442 439 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 DENND5BQ6ZUT9 1274 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 LIMS2Q7Z4I7 341 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 WDR75Q8IWA0 830 aaKnown RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 UNC5BQ8IZJ1 945 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 OR6Y1Q8NGX8 325 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 KBTBD7Q8WVZ9 684 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ISL2Q96A47 359 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 PANX3Q96QZ0 392 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 NAT9Q9BTE0 207 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 XPNPEP3Q9NQH7 507 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 MARCOQ9UEW3 520 aaPredicted RBP14.06□□□□□ -0.16
BRCA1-209ENST00000470026 DCDC2Q9UHG0 476 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ANGPTL2Q9UKU9 493 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 MFHAS1Q9Y4C4 1052 aa14.06□□□□□ -0.16
BRCA1-209ENST00000470026 ITM2AO43736 263 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 KITP10721 976 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-209ENST00000470026 GOT1P17174 413 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 MAGEA12P43365 314 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 PSEN1P49768 467 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 TUBP50607 506 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 PPIL2Q13356 520 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 PCLAFQ15004 111 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ZNF792Q3KQV3 632 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 N4BP2L1Q5TBK1 243 aaPredicted RBP14.05□□□□□ -0.16
BRCA1-209ENST00000470026 TMCO4Q5TGY1 634 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 C9orf57Q5W0N0 161 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 RIPOR1Q6ZS17 1223 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ZCCHC23Q6ZST2 131 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 KBTBD2Q8IY47 623 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 DTX3LQ8TDB6 740 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 CDKL2Q92772 493 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 CLMNQ96JQ2 1002 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 LPIN3Q9BQK8 851 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 VTA1Q9NP79 307 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.05□□□□□ -0.16
BRCA1-209ENST00000470026 TUBGCP4Q9UGJ1 667 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 WASF2Q9Y6W5 498 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ADM5C9JUS6 153 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 TPP1O14773 563 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 PROCP04070 461 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 SERPINE1P05121 402 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 PDHA1P08559 390 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 MATKP42679 507 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ALDH18A1P54886 795 aaKnown RBP14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ATG14Q6ZNE5 492 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ADGRG6Q86SQ4 1221 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 COLGALT1Q8NBJ5 622 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 PPFIBP2Q8ND30 876 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 BEST2Q8NFU1 509 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 OR6B3Q8NGW1 331 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 GATA6Q92908 595 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 NT5C3BQ969T7 300 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 IFT43Q96FT9 208 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 SORT1Q99523 831 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 KATNBL1Q9H079 304 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ADAMTS10Q9H324 1103 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 FAM96AQ9H5X1 160 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 DNAJC28Q9NX36 388 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 SNTG2Q9NY99 539 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 GJD2Q9UKL4 321 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 SOX13Q9UN79 622 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 ASB3Q9Y575 518 aa14.05□□□□□ -0.16
BRCA1-209ENST00000470026 A0A088AWK7 358 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 PIRO00625 290 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 ZNF195O14628 629 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 MFSD11O43934 449 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 KLHL2O95198 593 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 ITGA2BP08514 1039 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 ZNF286BP0CG31 522 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 MYL4P12829 197 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 ANPEPP15144 967 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 SP100P23497 879 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-209ENST00000470026 GRK2P25098 689 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 ARL4AP40617 200 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 SLC1A6P48664 564 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 CCNHP51946 323 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-209ENST00000470026 RPL10AP62906 217 aaKnown RBP14.04□□□□□ -0.16
BRCA1-209ENST00000470026 KDSRQ06136 332 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 FRG1Q14331 258 aaKnown RBP14.04□□□□□ -0.16
BRCA1-209ENST00000470026 SLC25A52Q3SY17 297 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 OTUD1Q5VV17 481 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-209ENST00000470026 OR52E8Q6IFG1 317 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 C16orf46Q6P387 395 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 AAGABQ6PD74 315 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 PYROXD2Q8N2H3 581 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 LGMNQ99538 433 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 ZNF184Q99676 751 aaPredicted RBP14.04□□□□□ -0.16
BRCA1-209ENST00000470026 GDAP2Q9NXN4 497 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 IGSF9Q9P2J2 1179 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 DNAJC16Q9Y2G8 782 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 NR2E3Q9Y5X4 410 aa14.04□□□□□ -0.16
BRCA1-209ENST00000470026 MAP3K7O43318 606 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 HCRTO43612 131 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 CIB2O75838 187 aa14.03□□□□□ -0.16
BRCA1-209ENST00000470026 CCDC130P13994 396 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms