RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 LCMT1Q9UIC8 334 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 DNMT3LQ9UJW3 386 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 PRPSAP2O60256 369 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 APOEP02649 317 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 KRT1P04264 644 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 IL1R2P27930 398 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 GBP2P32456 591 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 AVPR1AP37288 418 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 SLC1A1P43005 524 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 KCNQ1P51787 676 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 GNG11P61952 73 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 SLC25A11Q02978 314 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 SMAD4Q13485 552 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ACAP1Q15027 740 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 PTPRNQ16849 979 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ZFYVE27Q5T4F4 411 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 TXNRD3NBQ6F5E7 133 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 KLHDC10Q6PID8 442 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 CYP4V2Q6ZWL3 525 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 BNIPLQ7Z465 357 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 NT5DC3Q86UY8 548 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 CMTM8Q8IZV2 173 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ZNF276Q8N554 614 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ST13P5Q8NFI4 369 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 TRIM58Q8NG06 486 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 MAFAQ8NHW3 353 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ZSCAN18Q8TBC5 510 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 HSPH1Q92598 858 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 KRT35Q92764 455 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 FGF13Q92913 245 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 WBP2Q969T9 261 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 PGAP3Q96FM1 320 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 CALR3Q96L12 384 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 WDR24Q96S15 920 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 MYADMQ96S97 322 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 SNRNP25Q9BV90 132 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 KLF16Q9BXK1 252 aaPredicted RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 GKN1Q9NS71 199 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 CFAP97Q9P2B7 532 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 AMFRQ9UKV5 643 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 USP18Q9UMW8 372 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 CCL26Q9Y258 94 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 TLR6Q9Y2C9 796 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 HBS1LQ9Y450 684 aaKnown RBP8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ALG6Q9Y672 507 aa8.71□□□□□ -1.02
GAPVD1-213ENST00000469498 ATG2BQ96BY7 2078 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ESPNB1AK53 854 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 I6L893 689 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ENC1O14682 589 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 MBTPS2O43462 519 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 STC2O76061 302 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ENDOD1O94919 500 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 F9P00740 461 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 IGLV3-27P01718 113 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 PFKLP17858 780 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 CORO1AP31146 461 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 CCR1P32246 355 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 PCK1P35558 622 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 CXCR3P49682 368 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SLC7A9P82251 487 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ZXDBP98169 803 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 USP4Q13107 963 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 NNTQ13423 1086 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 HADHQ16836 314 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ATP13A4Q4VNC1 1196 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 EFHC2Q5JST6 749 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 KCNT1Q5JUK3 1230 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SYT10Q6XYQ8 523 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SLFN11Q7Z7L1 901 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 RIN3Q8TB24 985 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ADAMTS19Q8TE59 1207 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SH3RF2Q8TEC5 729 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SUSD6Q92537 303 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 CD101Q93033 1021 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 PLD4Q96BZ4 506 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SLC39A13Q96H72 371 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 PSMB7Q99436 277 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 MAGEB5Q9BZ81 275 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 TKTL2Q9H0I9 626 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 DHX35Q9H5Z1 703 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 WDCPQ9H6R7 721 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ANLNQ9NQW6 1124 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 PRDM6Q9NQX0 595 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 XPO7Q9UIA9 1087 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 CDH7Q9ULB5 785 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 ARHGAP26Q9UNA1 814 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 AP4E1Q9UPM8 1137 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 SNX10Q9Y5X0 201 aa8.7□□□□□ -1.02
GAPVD1-213ENST00000469498 MYO18AQ92614 2054 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 LRRD1A4D1F6 860 aa8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 PI4K2BG5E9Z4 385 aa8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 TNFRSF10AO00220 468 aa8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 LEFTY2O00292 366 aa8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 FANCGO15287 622 aa8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 DDX3YO15523 660 aaKnown RBP8.69□□□□□ -1.02
GAPVD1-213ENST00000469498 PSTPIP1O43586 416 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms