RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 MATKP42679 507 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 TNS4Q8IZW8 715 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 TEKT4Q8WW24 435 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 CYLDQ9NQC7 956 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 DDIT4Q9NX09 232 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 MCM8Q9UJA3 840 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 G3BP2Q9UN86 482 aaKnown RBP18.37■□□□□ 0.53
MCF2L-221ENST00000469415 RPS6KL1Q9Y6S9 549 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 HTTP42858 3142 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 NRCAMQ92823 1304 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 EEF2KO00418 725 aaKnown RBP18.37■□□□□ 0.53
MCF2L-221ENST00000469415 PIRO00625 290 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 TPP1O14773 563 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 C1QAP02745 245 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 ALADP13716 330 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 PRKD1Q15139 912 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-221ENST00000469415 RINLQ6ZS11 566 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 LRRC52Q8N7C0 313 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 CADM1Q9BY67 442 aaKnown RBP18.37■□□□□ 0.53
MCF2L-221ENST00000469415 LRMDAQ9H2I8 198 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 CAB39LQ9H9S4 337 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 PLEKHA5Q9HAU0 1116 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 TXNDC16Q9P2K2 825 aa18.37■□□□□ 0.53
MCF2L-221ENST00000469415 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 MEI4A8MW99 385 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 DPYSL4O14531 572 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 AP1G2O75843 785 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 DLDP09622 509 aaKnown RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 RASA2Q15283 850 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 DLG2Q15700 870 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 WLSQ5T9L3 541 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 RGS9BPQ6ZS82 235 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SH2D5Q6ZV89 423 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SMG8Q8ND04 991 aaKnown RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 L3MBTL3Q96JM7 780 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 C15orf41Q9Y2V0 281 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 I6L893 689 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 ITM2AO43736 263 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 POMCP01189 267 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 ELF1P32519 619 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 PSEN2P49810 448 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 CLCNKBP51801 687 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SLC18A2Q05940 514 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 UBAP2LQ14157 1087 aaKnown RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 UBXN11Q5T124 520 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 N4BP2L1Q5TBK1 243 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 UNC93AQ86WB7 457 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 ZNF567Q8N184 647 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 PPCSQ9HAB8 311 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 MYADML2A6NDP7 307 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 PTGESO14684 152 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SNX16P57768 344 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 GRB14Q14449 540 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 KHDC1Q4VXA5 237 aaKnown RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 IQSEC1Q6DN90 963 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 CXCL17Q6UXB2 119 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 CLEC20AQ6ZU45 233 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 PAQR9Q6ZVX9 377 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SLC25A41Q8N5S1 370 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 POU5F2Q8N7G0 328 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 PNPLA1Q8N8W4 532 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 OXNAD1Q96HP4 312 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 TNIP3Q96KP6 325 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 ZNF560Q96MR9 790 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 CXorf56Q9H5V9 222 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 YY1AP1Q9H869 796 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.36■□□□□ 0.53
MCF2L-221ENST00000469415 CNTN3Q9P232 1028 aa18.36■□□□□ 0.53
MCF2L-221ENST00000469415 A0A0A0MRY4 1105 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 PGK1P00558 417 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 CD4P01730 458 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 ERCC2P18074 760 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 CCND1P24385 295 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 PTPN9P43378 593 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 SLC18A1P54219 525 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 VWA5B1Q5TIE3 1220 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 RWDD4Q6NW29 188 aaKnown RBP18.35■□□□□ 0.53
MCF2L-221ENST00000469415 NT5DC4Q86YG4 428 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 TTC39CQ8N584 583 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 SENP8Q96LD8 212 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 SPATA13Q96N96 652 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 AGAP2Q99490 1192 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 MIOSQ9NXC5 875 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 ZFATQ9P243 1243 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 CPSF2Q9P2I0 782 aaKnown RBP18.35■□□□□ 0.53
MCF2L-221ENST00000469415 COL1A2P08123 1366 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-221ENST00000469415 B2RBV5 119 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 SETSIPP0DME0 302 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 NPR3P17342 541 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 SCNN1GP51170 649 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 KPNB1Q14974 876 aaKnown RBP18.35■□□□□ 0.53
MCF2L-221ENST00000469415 CCDC6Q16204 474 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 EFHC1Q5JVL4 640 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 ARHGAP17Q68EM7 881 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 TREML1Q86YW5 311 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 EFCAB3Q8N7B9 438 aa18.35■□□□□ 0.53
MCF2L-221ENST00000469415 ZNF669Q96BR6 464 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-221ENST00000469415 QKIQ96PU8 341 aaKnown RBP eCLIP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms