RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RAD9AQ99638 391 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 KLC2Q9H0B6 622 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 FBXO44Q9H4M3 255 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 HOMER3Q9NSC5 361 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 COMMD8Q9NX08 183 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.55□□□□□ -1.047e-7■□□□□ 9.9
BRCA1-208ENST00000468300 SNX24Q9Y343 169 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 SPTBN5Q9NRC6 3674 aaKnown RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 CAPN9O14815 690 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 IGLV3-27P01718 113 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 CTSAP10619 480 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 AMPD1P23109 780 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 AIF1P55008 147 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 ERVFC1P60507 584 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 CUL1Q13616 776 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 LILRA6Q6PI73 481 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 TRIM74Q86UV6 250 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 TRIM73Q86UV7 250 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 FIBCD1Q8N539 461 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 RUNDC3BQ96NL0 473 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 TRIM31Q9BZY9 425 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 TKTL2Q9H0I9 626 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 RETREG1Q9H6L5 497 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 ARFGAP3Q9NP61 516 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 CNPP09543 421 aaKnown RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 DNAJB2P25686 324 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 YWHAQP27348 245 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 PEX19P40855 299 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 KRT81Q14533 505 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 TRIP13Q15645 432 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 C10orf62Q5T681 223 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 TPGS2Q68CL5 300 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 ZCCHC8Q6NZY4 707 aaKnown RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 C1orf228Q6PIY5 440 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 NETO2Q8NC67 525 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 RNF139Q8WU17 664 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 DPF3Q92784 378 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 MYRFLQ96LU7 910 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 CEP295NLQ96MC4 621 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 CLIC5Q9NZA1 410 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 DTLQ9NZJ0 730 aa8.55□□□□□ -1.04
BRCA1-208ENST00000468300 RCOR3Q9P2K3 495 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 UTP11Q9Y3A2 253 aaKnown RBP8.55□□□□□ -1.04
BRCA1-208ENST00000468300 LINC01553A4QN01 128 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 RTN3O95197 1032 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 F9P00740 461 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 ATP2A2P16615 1042 aaKnown RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 TGM2P21980 687 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 CASP8Q14790 479 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 UAP1Q16222 522 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 BTBD8Q5XKL5 378 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 TMCO3Q6UWJ1 677 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 RFX8Q6ZV50 586 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 CHCHD4Q8N4Q1 142 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 NPWQ8N729 165 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 FBXO25Q8TCJ0 367 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 RTP4Q96DX8 246 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 WDCPQ9H6R7 721 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 CCSER2Q9H7U1 834 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 FAM204AQ9H8W3 233 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 PRKAG2Q9UGJ0 569 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 RSPH14Q9UHP6 348 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 NOTCH4Q99466 2003 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 GRXCR1A8MXD5 290 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 C5orf67F2Z3F1 127 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 AGPSO00116 658 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 TIMM44O43615 452 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 MCM3P25205 808 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 HOXC13P31276 330 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 PPM1AP35813 382 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 GGCXP38435 758 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 HCAR3P49019 387 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 PAFAH1B3Q15102 231 aaKnown RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 SYDE1Q6ZW31 735 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 TCEAL8Q8IYN2 117 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 ZNF276Q8N554 614 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 MREGQ8N565 214 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 FBXO32Q969P5 355 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 C17orf80Q9BSJ5 609 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 FRMD8P1Q9BZ68 369 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 RAB17Q9H0T7 212 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 OSBPL2Q9H1P3 480 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 LRRC4CQ9HCJ2 640 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 ALG13Q9NP73 1137 aaKnown RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 ARGLU1Q9NWB6 273 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-208ENST00000468300 HPCAL4Q9UM19 191 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 TLR6Q9Y2C9 796 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 YIPF1Q9Y548 306 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 NR2E3Q9Y5X4 410 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 SLC4A7Q9Y6M7 1214 aa8.54□□□□□ -1.04
BRCA1-208ENST00000468300 TRIM64CA6NLI5 447 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 HIDE1A8MVS5 230 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 APOL1O14791 398 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 TGM5O43548 720 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 MFSD11O43934 449 aa8.53□□□□□ -1.04
BRCA1-208ENST00000468300 RARGP13631 454 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms