RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 AGPSO00116 658 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 SLC16A5O15375 505 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 KRT36O76013 467 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 ALDH2P05091 517 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 TMEM225BP0DP42 221 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 NPR1P16066 1061 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 GM2AP17900 193 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 EPHB1P54762 984 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 DLX5P56178 289 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 RAE1P78406 368 aaKnown RBP4.36□□□□□ -1.71
XRN1-206ENST00000467077 WBP2NLQ6ICG8 309 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 ZDHHC24Q6UX98 284 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 Q6ZTK2 550 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 DDIASQ8IXT1 998 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 PLBD2Q8NHP8 589 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 DIS3LQ8TF46 1054 aaKnown RBP4.36□□□□□ -1.71
XRN1-206ENST00000467077 ZNF518BQ9C0D4 1074 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 ISCUQ9H1K1 167 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 A1CFQ9NQ94 594 aaKnown RBP4.36□□□□□ -1.71
XRN1-206ENST00000467077 UTS2RQ9UKP6 389 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 FZD10Q9ULW2 581 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 CEP170Q5SW79 1584 aa4.36□□□□□ -1.71
XRN1-206ENST00000467077 FCGR1AP12314 374 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 HOXD3P31249 432 aaPredicted RBP4.35□□□□□ -1.71
XRN1-206ENST00000467077 CIITAP33076 1130 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 EEF1A2Q05639 463 aaKnown RBP4.35□□□□□ -1.71
XRN1-206ENST00000467077 DSC1Q08554 894 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 CLCA4Q14CN2 919 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 ADAM5Q6NVV9 412 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.35□□□□□ -1.71
XRN1-206ENST00000467077 USP49Q70CQ1 688 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 TPH2Q8IWU9 490 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 MUC20Q8N307 709 aaPredicted RBP4.35□□□□□ -1.71
XRN1-206ENST00000467077 CELF1Q92879 486 aaKnown RBP4.35□□□□□ -1.71
XRN1-206ENST00000467077 AIFM3Q96NN9 605 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 HIST1H2AAQ96QV6 131 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 C1QTNF4Q9BXJ3 329 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 DPH1Q9BZG8 443 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 CDH19Q9H159 772 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 PLAC1Q9HBJ0 212 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 NMRK2Q9NPI5 230 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.35□□□□□ -1.71
XRN1-206ENST00000467077 DNAJB11Q9UBS4 358 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 PTGDR2Q9Y5Y4 395 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 CUX1P39880 1505 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 SHROOM2Q13796 1616 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 ABCA5Q8WWZ7 1642 aa4.35□□□□□ -1.71
XRN1-206ENST00000467077 A0A1B0GVY2 172 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 RFPL1O75677 317 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 RASSF9O75901 435 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 PPP1R3DO95685 299 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 MBPP02686 304 aaPredicted RBP4.34□□□□□ -1.71
XRN1-206ENST00000467077 CYP1A2P05177 515 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 HSPA6P17066 643 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 RBL1P28749 1068 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 SOX2P48431 317 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 RBM39Q14498 530 aaKnown RBP4.34□□□□□ -1.71
XRN1-206ENST00000467077 LIPMQ5VYY2 423 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 CLEC9AQ6UXN8 241 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 DSTYKQ6XUX3 929 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 ARMC9Q7Z3E5 817 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 DENND1CQ8IV53 801 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.34□□□□□ -1.71
XRN1-206ENST00000467077 RTP4Q96DX8 246 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 LRGUKQ96M69 825 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 NODALQ96S42 347 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 ZIM2Q9NZV7 527 aa4.34□□□□□ -1.71
XRN1-206ENST00000467077 PLEKHB1Q9UF11 243 aaPredicted RBP4.34□□□□□ -1.71
XRN1-206ENST00000467077 THRAP3Q9Y2W1 955 aaKnown RBP4.34□□□□□ -1.71
XRN1-206ENST00000467077 GRIN2AQ12879 1464 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 EMSYQ7Z589 1322 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 LOC102724159A0A0B4J2E5 919 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 MBD3L3A6NE82 208 aaPredicted RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 INAFM1C9JVW0 142 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 H3BML4 177 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 AKR1A1P14550 325 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 AGFG1P52594 562 aaKnown RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 TROAPQ12815 778 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 DNASE1L3Q13609 305 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 PGM5Q15124 567 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 PWP2Q15269 919 aaKnown RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 PLEKHG6Q3KR16 790 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 ODR4Q5SWX8 454 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 B3GNT9Q6UX72 402 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 H1FNTQ75WM6 255 aaPredicted RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 CTU1Q7Z7A3 348 aaKnown RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 RAVER1Q8IY67 606 aaKnown RBP4.33□□□□□ -1.72
XRN1-206ENST00000467077 ABHD10Q9NUJ1 306 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 HDAC9Q9UKV0 1011 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 VPS4AQ9UN37 437 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 SLC8A2Q9UPR5 921 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 SLC27A6Q9Y2P4 619 aa4.33□□□□□ -1.72
XRN1-206ENST00000467077 ADAMTS12P58397 1594 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 DIP2BQ9P265 1576 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 A0A088AWK7 358 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 AQP7P3A6NL99 342 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 RHODO00212 210 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 BUB3O43684 328 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms