RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 RANBP10Q6VN20 620 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 MRPL10Q7Z7H8 261 aaKnown RBP4.1□□□□□ -1.75
CCDC58-203ENST00000466854 PIP4P1Q86T03 277 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 CCDC28AQ8IWP9 274 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 PNPLA1Q8N8W4 532 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 MBD3L2Q8NHZ7 208 aaPredicted RBP4.1□□□□□ -1.75
CCDC58-203ENST00000466854 SUN3Q8TAQ9 357 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 ZNF622Q969S3 477 aaKnown RBP eCLIP4.1□□□□□ -1.75
CCDC58-203ENST00000466854 PRR11Q96HE9 360 aaPredicted RBP4.1□□□□□ -1.75
CCDC58-203ENST00000466854 VCPIP1Q96JH7 1222 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 EIF3CQ99613 913 aaKnown RBP4.1□□□□□ -1.75
CCDC58-203ENST00000466854 ADGRE3Q9BY15 652 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 VPS51Q9UID3 782 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 SLC45A1Q9Y2W3 748 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 PCDHB2Q9Y5E7 798 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 PCDHGB2Q9Y5G2 931 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 GRIN2BQ13224 1484 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 ABCA5Q8WWZ7 1642 aa4.1□□□□□ -1.75
CCDC58-203ENST00000466854 FAM234BA2RU67 622 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 CLCA1A8K7I4 914 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 RASA4BC9J798 803 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 PODXLO00592 558 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 RASA4O43374 803 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 TMIGD3P0DMS9 266 aaPredicted RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 SNHG28P0DPA3 235 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 GALNSP34059 522 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 THBS4P35443 961 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 CFHR3Q02985 330 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 MORC3Q14149 939 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 CLCA4Q14CN2 919 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 SEC23BQ15437 767 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 PFKFB3Q16875 520 aaPredicted RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 IZUMO3Q5VZ72 239 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 ABLIM2Q6H8Q1 611 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 GRHL2Q6ISB3 625 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 CASC1Q6TDU7 716 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 KRT77Q7Z794 578 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 TTC30AQ86WT1 665 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 SKAP1Q86WV1 359 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 ZDHHC17Q8IUH5 632 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 SPICE1Q8N0Z3 855 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 OR2C3Q8N628 320 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 LINC01465Q8N7H1 131 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 MYRIPQ8NFW9 859 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 OSR1Q8TAX0 266 aaPredicted RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 IGFBPL1Q8WX77 278 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 SERINC2Q96SA4 455 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 SELENOOQ9BVL4 669 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 COLEC11Q9BWP8 271 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 EIF2AQ9BY44 585 aaKnown RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 PCGF6Q9BYE7 350 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 ZHX3Q9H4I2 956 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 RETREG1Q9H6L5 497 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 CLIC5Q9NZA1 410 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 RGS17Q9UGC6 210 aaPredicted RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 TAGLN3Q9UI15 199 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 HEMK1Q9Y5R4 338 aaPredicted RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 GLI2P10070 1586 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 ADAMTS12P58397 1594 aa4.09□□□□□ -1.75
CCDC58-203ENST00000466854 MED1Q15648 1581 aaPredicted RBP4.09□□□□□ -1.75
CCDC58-203ENST00000466854 PRAMEF2O60811 474 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 RNASEH2AO75792 299 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 FGF18O76093 207 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 IGHDP01880 384 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 SLC3A2P08195 630 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 IFIT2P09913 472 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 ARP10275 920 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 TOP2AP11388 1531 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 RRM1P23921 792 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 EEF1GP26641 437 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 HTR7P34969 479 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 COL15A1P39059 1388 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 GSTM5P46439 218 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 MMP14P50281 582 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 DGKQP52824 942 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 GPC5P78333 572 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 CUL7Q14999 1698 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 LARS2Q15031 903 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 BRD3Q15059 726 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 SLC35G1Q2M3R5 365 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 ALDH1L2Q3SY69 923 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 TMEM196Q5HYL7 178 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 FAM83BQ5T0W9 1011 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 TMEM63BQ5T3F8 832 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 USP17L6PQ6QN14 398 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 KIAA0408Q6ZU52 694 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 FAM186BQ8IYM0 893 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 GLIS1Q8NBF1 620 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 SNRNP27Q8WVK2 155 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 MADDQ8WXG6 1647 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 BRI3BPQ8WY22 251 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 MAP4K1Q92918 833 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 MUL1Q969V5 352 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 KIAA1191Q96A73 305 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 ERP27Q96DN0 273 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 EDC3Q96F86 508 aaKnown RBP4.08□□□□□ -1.76
CCDC58-203ENST00000466854 EPS8L2Q9H6S3 715 aa4.08□□□□□ -1.76
CCDC58-203ENST00000466854 SAP30LQ9HAJ7 183 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms