RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 C15orf38-AP3S2A0A0A6YYH1 394 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CAPN8A6NHC0 703 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 PEX1O43933 1283 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 PGM3O95394 542 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 MYL4P12829 197 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CYP2F1P24903 491 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 HARS2P49590 506 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 HMGCS2P54868 508 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 MTTPP55157 894 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 SEMA5AQ13591 1074 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 TLR1Q15399 786 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 SMAD1Q15797 465 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 OGFRL1Q5TC84 451 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 MAP3K21Q5TCX8 1036 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 SDCCAG8Q86SQ7 713 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 ZBTB8OSQ8IWT0 167 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CMTM5Q96DZ9 223 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 GCNAQ96QF7 691 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CDT1Q9H211 546 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 PIH1D1Q9NWS0 290 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CLIC5Q9NZA1 410 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 SMIM31A0A1B0GVY4 71 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 DPYSL4O14531 572 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 DCXO43602 365 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 ABCE1P61221 599 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 RPL26P61254 145 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 GRAMD1BQ3KR37 738 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 C4orf22Q6V702 233 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 TMC7Q7Z402 723 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 PPP4R1Q8TF05 950 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 NMD3Q96D46 503 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 BTBD9Q96Q07 612 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 ZNF670Q9BS34 389 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 RNPEPQ9H4A4 650 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 MTMR10Q9NXD2 777 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 COPG2Q9UBF2 871 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 PPP1R1BQ9UD71 204 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 TSPAN16Q9UKR8 245 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 LACTBL1A8MY62 500 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 ZBTB42B2RXF5 422 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 COX4I1P13073 169 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 GRK2P25098 689 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 FDFT1P37268 417 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 ARMC3Q5W041 872 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 JADE1Q6IE81 842 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 KCNT2Q6UVM3 1135 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 FAM81AQ8TBF8 368 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 VPS33BQ9H267 617 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 EPB41L1Q9H4G0 881 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 RPF1Q9H9Y2 349 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 PIM2Q9P1W9 311 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 DCDC2Q9UHG0 476 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 PACSIN3Q9UKS6 424 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 PCDHGB5Q9Y5G0 923 aa13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
PDZRN3-205ENST00000466780 E2F8A0AVK6 867 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 PDLIM1O00151 329 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 GPR25O00155 361 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ACKR2O00590 384 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 PYGLP06737 847 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ITGA2BP08514 1039 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 RALBP11234 206 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 NDST1P52848 882 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 HDAC4P56524 1084 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 USP4Q13107 963 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ITGA9Q13797 1035 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 TTLL12Q14166 644 aaPredicted RBP13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 STILQ15468 1287 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 CASC4Q6P4E1 433 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ICA1LQ8NDH6 482 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ARNTL2Q8WYA1 636 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 WRNIP1Q96S55 665 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 TBCBQ99426 244 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 FZD8Q9H461 694 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 IFT122Q9HBG6 1241 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 PICK1Q9NRD5 415 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 UBAP1Q9NZ09 502 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 MFHAS1Q9Y4C4 1052 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 DTNAQ9Y4J8 743 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 INO80B-WBP1J3KQ70 363 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 MDM4O15151 490 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ATP9BO43861 1147 aa13.35□□□□□ -0.27
PDZRN3-205ENST00000466780 ALDH1A3P47895 512 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 387.4 ms