RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 FAM107BQ9H098 131 aa21.14■□□□□ 0.97
CCDC78-207ENST00000466708 TKTL2Q9H0I9 626 aa21.14■□□□□ 0.97
CCDC78-207ENST00000466708 ANLNQ9NQW6 1124 aa21.14■□□□□ 0.97
CCDC78-207ENST00000466708 NKIRAS1Q9NYS0 192 aa21.14■□□□□ 0.97
CCDC78-207ENST00000466708 NBNO60934 754 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 IGLV3-25P01717 112 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 DRD4P21917 467 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 YWHAGP61981 247 aaKnown RBP eCLIP21.13■□□□□ 0.97
CCDC78-207ENST00000466708 AP1B1Q10567 949 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 SLC39A12Q504Y0 691 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 TAC4Q86UU9 113 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 IGDCC3Q8IVU1 814 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 DBF4BQ8NFT6 615 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 SCAMP5Q8TAC9 235 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 SEPT8Q92599 483 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 P2RY11Q96G91 374 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 SGSM3Q96HU1 749 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 PRDM12Q9H4Q4 367 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 DNAJB4Q9UDY4 337 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 PRG3Q9Y2Y8 225 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-207ENST00000466708 I6L893 689 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-207ENST00000466708 STX2P32856 288 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 MSH2P43246 934 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 EIF4EBP2Q13542 120 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-207ENST00000466708 BTBD8Q5XKL5 378 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 CCNYQ8ND76 341 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 RNF34Q969K3 372 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 PAFAH2Q99487 392 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 OSBPL2Q9H1P3 480 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 TRABDQ9H4I3 376 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 EIF2B3Q9NR50 452 aaKnown RBP21.13■□□□□ 0.97
CCDC78-207ENST00000466708 OR12D3Q9UGF7 316 aa21.13■□□□□ 0.97
CCDC78-207ENST00000466708 SMG5Q9UPR3 1016 aaKnown RBP21.13■□□□□ 0.97
CCDC78-207ENST00000466708 ZNF638Q14966 1978 aaKnown RBP21.12■□□□□ 0.97
CCDC78-207ENST00000466708 FAM47DPA6NHR8 397 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 FOXO6A8MYZ6 492 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 TRDMT1O14717 391 aaKnown RBP21.12■□□□□ 0.97
CCDC78-207ENST00000466708 PRPF4O43172 522 aaKnown RBP eCLIP21.12■□□□□ 0.97
CCDC78-207ENST00000466708 AVILO75366 819 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 MLNP12872 115 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 MX2P20592 715 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 SERPINB6P35237 376 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 GPNMBQ14956 572 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 PKN2Q16513 984 aaKnown RBP21.12■□□□□ 0.97
CCDC78-207ENST00000466708 BRMS1LQ5PSV4 323 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 SYCP2LQ5T4T6 812 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 CCDC33Q8N5R6 958 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 SMC6Q96SB8 1091 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 SSU72Q9NP77 194 aaKnown RBP21.12■□□□□ 0.97
CCDC78-207ENST00000466708 ADAM28Q9UKQ2 775 aa21.12■□□□□ 0.97
CCDC78-207ENST00000466708 TCRBV9S1A1TA0A576 114 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 RNF103O00237 685 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 MTSS1O43312 755 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 HOXA2O43364 376 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 MTM1Q13496 603 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 MPP2Q14168 576 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 PARP6Q2NL67 630 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 GKAP1Q5VSY0 366 aaPredicted RBP21.11■□□□□ 0.97
CCDC78-207ENST00000466708 ANKRD42Q8N9B4 389 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 COLGALT1Q8NBJ5 622 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 C8orf48Q96LL4 319 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 ZC3H7BQ9UGR2 993 aaKnown RBP21.11■□□□□ 0.97
CCDC78-207ENST00000466708 TRIM17Q9Y577 477 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 ATXN2Q99700 1313 aaKnown RBP21.11■□□□□ 0.97
CCDC78-207ENST00000466708 TRIM66O15016 1216 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 IRAK2O43187 625 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 HTR7P34969 479 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 MAGEA11P43364 429 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 IFNAR2P48551 515 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 VARS2Q5ST30 1063 aaKnown RBP21.11■□□□□ 0.97
CCDC78-207ENST00000466708 SCN4BQ8IWT1 228 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 CKAP2Q8WWK9 683 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 CASD1Q96PB1 797 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 HAPLN3Q96S86 360 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 NSRP1Q9H0G5 558 aaKnown RBP21.11■□□□□ 0.97
CCDC78-207ENST00000466708 SMOC2Q9H3U7 446 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 ARHGEF38Q9NXL2 777 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 ABI2Q9NYB9 513 aaPredicted RBP21.11■□□□□ 0.97
CCDC78-207ENST00000466708 LRFN2Q9ULH4 789 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 PCDHB5Q9Y5E4 795 aa21.11■□□□□ 0.97
CCDC78-207ENST00000466708 OR6C75A6NL08 312 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 ALDH2P05091 517 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 OR4Q2P0C623 313 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 WASHC5Q12768 1159 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 MRPL58Q14197 206 aaKnown RBP21.1■□□□□ 0.97
CCDC78-207ENST00000466708 DENND5BQ6ZUT9 1274 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 ZNF534Q76KX8 674 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 SRLQ86TD4 932 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 AGGF1Q8N302 714 aaeCLIP21.1■□□□□ 0.97
CCDC78-207ENST00000466708 MGARPQ8TDB4 240 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 SH3TC2Q8TF17 1288 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 DCAKDQ8WVC6 231 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 SIGLEC10Q96LC7 697 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 FBXO44Q9H4M3 255 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 IGSF9Q9P2J2 1179 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 IKBKGQ9Y6K9 419 aa21.1■□□□□ 0.97
CCDC78-207ENST00000466708 LRIG2O94898 1065 aa21.09■□□□□ 0.97
CCDC78-207ENST00000466708 CPP00450 1065 aa21.09■□□□□ 0.97
CCDC78-207ENST00000466708 AMHP03971 560 aa21.09■□□□□ 0.97
CCDC78-207ENST00000466708 EPHB2P29323 1055 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms