RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 LHX5Q9H2C1 402 aa17.3■□□□□ 0.36
SDHB-203ENST00000466613 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
SDHB-203ENST00000466613 TJP2Q9UDY2 1190 aa17.3■□□□□ 0.36
SDHB-203ENST00000466613 CYP8B1Q9UNU6 501 aa17.3■□□□□ 0.36
SDHB-203ENST00000466613 PI4KAP42356 2102 aa17.3■□□□□ 0.36
SDHB-203ENST00000466613 IGHV1OR15-9A0A0B4J2B8 117 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 FOXN3O00409 490 aaPredicted RBP17.29■□□□□ 0.36
SDHB-203ENST00000466613 TBL1XO60907 577 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 EEF1GP26641 437 aaKnown RBP17.29■□□□□ 0.36
SDHB-203ENST00000466613 CLCN1P35523 988 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 ARID5AQ03989 594 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 KCNMA1Q12791 1236 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 FUT11Q495W5 492 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 TCP11X2Q5H9J9 407 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 STPG1Q5TH74 334 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 LYSMD4Q5XG99 296 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 IL31Q6EBC2 164 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 RBM43Q6ZSC3 357 aaKnown RBP17.29■□□□□ 0.36
SDHB-203ENST00000466613 CHST9Q7L1S5 443 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 KIAA0907Q7Z7F0 614 aaPredicted RBP17.29■□□□□ 0.36
SDHB-203ENST00000466613 SLC47A2Q86VL8 602 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 AHI1Q8N157 1196 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 ZNF557Q8N988 423 aaPredicted RBP17.29■□□□□ 0.36
SDHB-203ENST00000466613 HJURPQ8NCD3 748 aaPredicted RBP17.29■□□□□ 0.36
SDHB-203ENST00000466613 GPT2Q8TD30 523 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 SORCS1Q8WY21 1168 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 PPP1R13BQ96KQ4 1090 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 NOX5Q96PH1 765 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 CPXM1Q96SM3 734 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 EDEM2Q9BV94 578 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 ABCB8Q9NUT2 735 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 GGA2Q9UJY4 613 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 NFE2L3Q9Y4A8 694 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 SPTBN2O15020 2390 aa17.29■□□□□ 0.36
SDHB-203ENST00000466613 NCOR2Q9Y618 2525 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 GON4LQ3T8J9 2241 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 LNP1A1A4G5 178 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 TYW5A2RUC4 315 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 PES1O00541 588 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 KHNYNO15037 678 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 SYNCRIPO60506 623 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 TRUB2O95900 331 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 IGLV3-25P01717 112 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 APOEP02649 317 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 GLI1P08151 1106 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 PNMA6AP0CW24 399 aaPredicted RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 PABPC1P11940 636 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 PRKCHP24723 683 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 DPP6P42658 865 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 KIAA1324Q6UXG2 1013 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 SERPINA13PQ6UXR4 307 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 SYT12Q8IV01 421 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 FAM71AQ8IYT1 594 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 C1orf131Q8NDD1 294 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 ENOX1Q8TC92 643 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 WFDC5Q8TCV5 224 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 DDX1Q92499 740 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 PRICKLE1Q96MT3 831 aaPredicted RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 MKRN2Q9H000 416 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 NUCKS1Q9H1E3 243 aaKnown RBP17.28■□□□□ 0.36
SDHB-203ENST00000466613 ASNSD1Q9NWL6 643 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 FHOD1Q9Y613 1164 aa17.28■□□□□ 0.36
SDHB-203ENST00000466613 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
SDHB-203ENST00000466613 PATE3B3GLJ2 98 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 MOCS2O96007 188 aaPredicted RBP17.27■□□□□ 0.36
SDHB-203ENST00000466613 EPHX1P07099 455 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 KRT9P35527 623 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 BPIFB4P59827 614 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 RAPGEF1Q13905 1077 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 TAF5Q15542 800 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 MS4A13Q5J8X5 152 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 EFHC1Q5JVL4 640 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 PEAR1Q5VY43 1037 aaPredicted RBP17.27■□□□□ 0.36
SDHB-203ENST00000466613 METTL3Q86U44 580 aaKnown RBP17.27■□□□□ 0.36
SDHB-203ENST00000466613 ADIPOR2Q86V24 386 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 MFN1Q8IWA4 741 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 SLC2A13Q96QE2 648 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 PRDM16Q9HAZ2 1276 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 CD93Q9NPY3 652 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 TMEM74BQ9NUR3 256 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 EVLQ9UI08 416 aaPredicted RBP17.27■□□□□ 0.36
SDHB-203ENST00000466613 CEP83Q9Y592 693 aa17.27■□□□□ 0.36
SDHB-203ENST00000466613 ADAMTS9Q9P2N4 1935 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 GOLGA6L22H0YM25 854 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 TM4SF5O14894 197 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 HSF2BPO75031 334 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 ITPKAP23677 461 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 CD70P32970 193 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 HOXD12P35452 270 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 COPAP53621 1224 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 SNX16P57768 344 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 PITX1P78337 314 aaPredicted RBP17.26■□□□□ 0.35
SDHB-203ENST00000466613 ZNF33AQ06730 810 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 EIF4EBP2Q13542 120 aaPredicted RBP17.26■□□□□ 0.35
SDHB-203ENST00000466613 DRAP1Q14919 205 aaPredicted RBP17.26■□□□□ 0.35
SDHB-203ENST00000466613 DCAF6Q58WW2 860 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 ZC3H12AQ5D1E8 599 aaKnown RBP17.26■□□□□ 0.35
SDHB-203ENST00000466613 TRIM61Q5EBN2 209 aa17.26■□□□□ 0.35
SDHB-203ENST00000466613 PPM1JQ5JR12 505 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms