RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 KAZALD1Q96I82 304 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 BBC3Q96PG8 261 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 PPP1R10Q96QC0 940 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 TIMP4Q99727 224 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ADGRE3Q9BY15 652 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 PLEKHA2Q9HB19 425 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 UBN1Q9NPG3 1134 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 PACSIN3Q9UKS6 424 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 ENTPD2Q9Y5L3 495 aa4.89□□□□□ -1.63
CDC42BPA-211ENST00000466538 VWA3AA6NCI4 1184 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 A6NLC8 198 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 BTBD19C9JJ37 291 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 STX16-NPEPL1H3BU86 382 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 H7C1Q1 480 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 STX16O14662 325 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ZNF213O14771 459 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 PDE8BO95263 885 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 APEHP13798 732 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 WT1P19544 449 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 DRD4P21917 467 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 SFPQP23246 707 aaKnown RBP eCLIP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 PNPLA4P41247 253 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 COPB1P53618 953 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 FAM3BP58499 235 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 RAE1P78406 368 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 SIM1P81133 766 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ABHD18Q0P651 414 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 PDCLQ13371 301 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ZNF484Q5JVG2 852 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 HECTD2Q5U5R9 776 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ATG16L1Q676U5 607 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 LAIR1Q6GTX8 287 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 SLC39A5Q6ZMH5 540 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 BCDIN3DQ7Z5W3 292 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 CAGE1Q8TC20 777 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ADAMTS18Q8TE60 1221 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 LARP4BQ92615 738 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 HTRA1Q92743 480 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ARRDC3Q96B67 414 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 DAZAP1Q96EP5 407 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 FYTTD1Q96QD9 318 aaKnown RBP4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 SLC26A6Q9BXS9 759 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 GPR63Q9BZJ6 419 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 CIPCQ9C0C6 399 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 PDE11AQ9HCR9 933 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 SLC17A6Q9P2U8 582 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 VPS4AQ9UN37 437 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 ST3GAL5Q9UNP4 418 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 AFG3L2Q9Y4W6 797 aa4.88□□□□□ -1.63
CDC42BPA-211ENST00000466538 AGAP5A6NIR3 686 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 CLIC1O00299 241 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 JTBO76095 146 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 GCP02774 474 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 IFIT1P09914 478 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 FPR3P25089 353 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 CXCR5P32302 372 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 KRT9P35527 623 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 PSMC2P35998 433 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 AGTR2P50052 363 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 TUBP50607 506 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 TAS2R50P59544 299 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 MPP1Q00013 466 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 TBL3Q12788 808 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 THOC5Q13769 683 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 CNGA3Q16281 694 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 GLE1Q53GS7 698 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 CRIP3Q6Q6R5 217 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 KYAT3Q6YP21 454 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 PCYOX1LQ8NBM8 494 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 BEND2Q8NDZ0 799 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 AKAP1Q92667 903 aaKnown RBP eCLIP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 SH3KBP1Q96B97 665 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 ZNF845Q96IR2 970 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 CCDC17Q96LX7 622 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 SFXN1Q9H9B4 322 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 MAFFQ9ULX9 164 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 SUFUQ9UMX1 484 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 ITIH6Q6UXX5 1313 aa4.87□□□□□ -1.63
CDC42BPA-211ENST00000466538 FYB1O15117 783 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 EXOC3O60645 756 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 GUCY1B2O75343 617 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 ATF7P17544 494 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 SLC8A1P32418 973 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 HOXD12P35452 270 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 CACNA2D1P54289 1103 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 WDR5P61964 334 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 CYP4F2P78329 520 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 MFSD13AQ14CX5 517 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 BAK1Q16611 211 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 LIPMQ5VYY2 423 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 IGFL4Q6B9Z1 124 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 VSTM1Q6UX27 236 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 TRIM72Q6ZMU5 477 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 Q6ZPA2 131 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 LRRC8DQ7L1W4 858 aa4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 RSRC2Q7L4I2 434 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-211ENST00000466538 RASAL3Q86YV0 1011 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms