RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 OTUD4Q01804 1114 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 DHX34Q14147 1143 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 CCNG2Q16589 344 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 CYP1B1Q16678 543 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 ERCC6LQ2NKX8 1250 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 GLE1Q53GS7 698 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 GPR158Q5T848 1215 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 SLC9A4Q6AI14 798 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 C1orf228Q6PIY5 440 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 CCDC137Q6PK04 289 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 MAATS1Q7Z4T9 603 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 GRASPQ7Z6J2 395 aaPredicted RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 MAB21L3Q8N8X9 362 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 PCDH19Q8TAB3 1148 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 DDX50Q9BQ39 737 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 MAGEB5Q9BZ81 275 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 CATSPERBQ9H7T0 1116 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 ARHGEF4Q9NR80 690 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 SMPD4Q9NXE4 827 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 R3HDM2Q9Y2K5 976 aaKnown RBP12.54□□□□□ -0.4
VPS16-206ENST00000466415 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 CPQQ9Y646 472 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 HS3ST4Q9Y661 456 aa12.54□□□□□ -0.4
VPS16-206ENST00000466415 TMEM265A0A087WTH1 108 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 E9PAM4 449 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 F5H5T6 163 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 FAM72CH0Y354 149 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 I6L893 689 aaPredicted RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 FGF10O15520 208 aaPredicted RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 RAD51CO43502 376 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 LRIG2O94898 1065 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 ECEL1O95672 775 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 GAS8O95995 478 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 IL4RP24394 825 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 CORO1AP31146 461 aaKnown RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
VPS16-206ENST00000466415 AVPR1AP37288 418 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 HCAR3P49019 387 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 KCNQ1P51787 676 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 EIF3EP60228 445 aaKnown RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 NRG1Q02297 640 aaPredicted RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 LMNB2Q03252 620 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 SEMA3BQ13214 749 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 DPYSQ14117 519 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 TEAD2Q15562 447 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 ELF2Q15723 593 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 RARS2Q5T160 578 aaKnown RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 FAM72AQ5TYM5 149 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 PIK3R6Q5UE93 754 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 RAP1GAP2Q684P5 730 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 FAM72DQ6L9T8 149 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 TMCO3Q6UWJ1 677 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 TMC5Q6UXY8 1006 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 BZW1Q7L1Q6 419 aaKnown RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 GSTA5Q7RTV2 222 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 FAM72BQ86X60 149 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 PQLC3Q8N755 202 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 ACTL9Q8TC94 416 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 ZNF707Q96C28 371 aaPredicted RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 C1orf74Q96LT6 269 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 FAM118BQ9BPY3 351 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 KLF16Q9BXK1 252 aaPredicted RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 RNF38Q9H0F5 515 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 LRRC19Q9H756 370 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 AMACRQ9UHK6 382 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 FEZ2Q9UHY8 353 aaPredicted RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 XPO7Q9UIA9 1087 aaKnown RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 ZMYM5Q9UJ78 669 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 MRPS23Q9Y3D9 190 aaKnown RBP12.53□□□□□ -0.4
VPS16-206ENST00000466415 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 HEY1Q9Y5J3 304 aa12.53□□□□□ -0.4
VPS16-206ENST00000466415 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.4
VPS16-206ENST00000466415 FAM187AA6NFU0 413 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 H7C0C1 242 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 CTIFO43310 598 aaKnown RBP12.52□□□□□ -0.41
VPS16-206ENST00000466415 LIASO43766 372 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 ACSL4O60488 711 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 STC2O76061 302 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 OLFM2O95897 454 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 PECAM1P16284 738 aaPredicted RBP12.52□□□□□ -0.41
VPS16-206ENST00000466415 ERCC2P18074 760 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 TACR2P21452 398 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 ATP5OP48047 213 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 NR2C2P49116 596 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 VCPP55072 806 aaKnown RBP12.52□□□□□ -0.41
VPS16-206ENST00000466415 NTHL1P78549 312 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 SLC7A9P82251 487 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
VPS16-206ENST00000466415 HYAL1Q12794 435 aa12.52□□□□□ -0.41
VPS16-206ENST00000466415 AUHQ13825 339 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms