RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 HMGB4Q8WW32 186 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 PSMG2Q969U7 264 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 FERD3LQ96RJ6 166 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 LGMNQ99538 433 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ADPGKQ9BRR6 497 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 POLR3CQ9BUI4 534 aaPredicted RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 NFKBIZQ9BYH8 718 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 SEMA4CQ9C0C4 833 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 UNC45AQ9H3U1 944 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 DHX33Q9H6R0 707 aaKnown RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 ECT2Q9H8V3 914 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 C6orf50Q9HD87 102 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 TM7SF3Q9NS93 570 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ZNF451Q9Y4E5 1061 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 NUB1Q9Y5A7 615 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 PCNX2A6NKB5 2137 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 DOCK5Q9H7D0 1870 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 A0A1B0GTW7 788 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 TBX3O15119 743 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 MSH4O15457 936 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 NDUFS2O75306 463 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 RECQL4O94761 1208 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 STBD1O95210 358 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 CYBBP04839 570 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 IFNGR1P15260 489 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 ARSAP15289 507 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 CD247P20963 164 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 U2AF2P26368 475 aaKnown RBP eCLIP6.34□□□□□ -1.398e-8■■□□□ 12.3
NCL-208ENST00000466274 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 BRCC3P46736 316 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 QARSP47897 775 aaKnown RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 IFNAR2P48551 515 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 PDE1AP54750 535 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 SLURP1P55000 103 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 NPEPPSP55786 919 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 NFKB2Q00653 900 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 MBTD1Q05BQ5 628 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 NFATC3Q12968 1075 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 RTP5Q14D33 572 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 CCDC157Q569K6 752 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 FBXW10Q5XX13 1052 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 PLA2G4FQ68DD2 849 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 DHRS13Q6UX07 377 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 TMTC3Q6ZXV5 915 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 GAREM2Q75VX8 874 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 TRMT11Q7Z4G4 463 aaKnown RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 GGNQ86UU5 652 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 CCDC33Q8N5R6 958 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 DEFB119Q8N690 84 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 FANCBQ8NB91 859 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 ZNF248Q8NDW4 579 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 CCDC12Q8WUD4 166 aaPredicted RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 CRYGNQ8WXF5 182 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 SRRTQ9BXP5 876 aaKnown RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 TRIM4Q9C037 500 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 GAREM1Q9H706 876 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 GPRC5CQ9NQ84 441 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 TDP1Q9NUW8 608 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 SLC38A7Q9NVC3 462 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 PRMT7Q9NVM4 692 aaPredicted RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 DUS2Q9NX74 493 aaKnown RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 BARHL2Q9NY43 387 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 PCDHGA1Q9Y5H4 931 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 FHOD1Q9Y613 1164 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 SLC12A7Q9Y666 1083 aa6.34□□□□□ -1.39
NCL-208ENST00000466274 TEP1Q99973 2627 aaKnown RBP6.34□□□□□ -1.39
NCL-208ENST00000466274 COL4A2P08572 1712 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 NOTCH2Q04721 2471 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 A0A1B0GTL3 188 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 TCRBV21S2A2A0A5A6 115 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 ZC3H12DA2A288 527 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 MYMKA6NI61 221 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 I3L4J1 428 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 PRICKLE3O43900 615 aaPredicted RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 KLF8O95600 359 aaPredicted RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 C1SP09871 688 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 IMPDH2P12268 514 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 CR2P20023 1033 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 GNA11P29992 359 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 RPL9P32969 192 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 GRK6P43250 576 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 KCNC1P48547 511 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 TUFMP49411 452 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 PRR5P85299 388 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 PTH1RQ03431 593 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 ZNF268Q14587 947 aaPredicted RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 EMC2Q15006 297 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 NAB2Q15742 525 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 UNC5AQ6ZN44 842 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 DBX2Q6ZNG2 339 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 TAB3Q8N5C8 712 aaPredicted RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 FRMD1Q8N878 549 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 TXNDC5Q8NBS9 432 aaKnown RBP6.33□□□□□ -1.4
NCL-208ENST00000466274 BEST2Q8NFU1 509 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 EXOC6Q8TAG9 804 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 BICD2Q8TD16 824 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 OSCP1Q8WVF1 389 aa6.33□□□□□ -1.4
NCL-208ENST00000466274 SLC5A5Q92911 643 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms