RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 TRPV4Q9HBA0 871 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 NLRC4Q9NPP4 1024 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 CD93Q9NPY3 652 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 PPP1R14DQ9NXH3 145 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 PDP2Q9P2J9 529 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 HDAC6Q9UBN7 1215 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 GIMAP2Q9UG22 337 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 LAMP5Q9UJQ1 280 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 GRID1Q9ULK0 1009 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 DUSP12Q9UNI6 340 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 TBC1D30Q9Y2I9 924 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 CGNL1Q0VF96 1302 aa3.58□□□□□ -1.84
SNX4-202ENST00000465505 CYP2D7A0A087X1C5 515 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 SMIM35A0A1B0GVV1 85 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 CLRN2A0PK11 232 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 A1L4Q6 167 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 HNRNPCL2B2RXH8 293 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 EIF3FO00303 357 aaPredicted RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 ERC2O15083 957 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 POLR3GO15318 223 aaPredicted RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 KLHL41O60662 606 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 HNRNPCL1O60812 293 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 DTNBO60941 627 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 TBCAO75347 108 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 DAB1O75553 588 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 PAHP00439 452 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 HSPA1AP0DMV8 641 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 HSPA1BP0DMV9 641 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 KRT10P13645 584 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ATP6V1B1P15313 513 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 YY1P25490 414 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 PPIFP30405 207 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 CSTF2P33240 577 aaKnown RBP eCLIP3.57□□□□□ -1.84
SNX4-202ENST00000465505 NR4A2P43354 598 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 NEK2P51955 445 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 NEK3P51956 506 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 PDE1AP54750 535 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 LOXL3P58215 753 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 LILRA4P59901 499 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 AP2B1P63010 937 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 TMF1P82094 1093 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 CCDC173Q0VFZ6 552 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 PPP2R5CQ13362 524 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 PLS1Q14651 629 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 MLC1Q15049 377 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 SYCP1Q15431 976 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 KBTBD12Q3ZCT8 623 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ARHGAP40Q5TG30 622 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 HHATQ5VTY9 493 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ZBED9Q6R2W3 1325 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 CRTC1Q6UUV9 634 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 LAYNQ6UX15 382 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 INTS8Q75QN2 995 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 NLRP14Q86W24 1093 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 SPATA2LQ8IUW3 424 aaPredicted RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 SLC7A5P1Q8MH63 180 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 VPS52Q8N1B4 723 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 PNLDC1Q8NA58 520 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 OR52K2Q8NGK3 314 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 SGCDQ92629 289 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 GLG1Q92896 1179 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 CLMNQ96JQ2 1002 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 C5orf34Q96MH7 638 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 RBM14Q96PK6 669 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 ASB2Q96Q27 587 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 CRACR2AQ9BSW2 395 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 CENPOQ9BU64 300 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 HERC2P3Q9BVR0 1158 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 RTFDC1Q9BY42 306 aaPredicted RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 RHOBTB2Q9BYZ6 727 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ASPSCR1Q9BZE9 553 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 SPRTNQ9H040 489 aaPredicted RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 NCOR1P1Q9H4R4 102 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ELAC1Q9H777 363 aaKnown RBP3.57□□□□□ -1.84
SNX4-202ENST00000465505 PLCB1Q9NQ66 1216 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ANLNQ9NQW6 1124 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ANKEF1Q9NU02 776 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 BLOC1S4Q9NUP1 217 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 OBP2AQ9NY56 170 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 FBXL5Q9UKA1 691 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 ADAMTS5Q9UNA0 930 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 COG5Q9UP83 839 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 AFG3L2Q9Y4W6 797 aa3.57□□□□□ -1.84
SNX4-202ENST00000465505 GAKO14976 1311 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 KCNU1A8MYU2 1149 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 H3BUI4 141 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 RTCAO00442 366 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 AREL1O15033 823 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 RNF113AO15541 343 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 NMT2O60551 498 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 NBNO60934 754 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 TJP3O95049 919 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 PARP1P09874 1014 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 FERP16591 822 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 MATR3P43243 847 aaKnown RBP eCLIP3.56□□□□□ -1.84
SNX4-202ENST00000465505 ASMTP46597 345 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 PIN1Q13526 163 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 SEMA3AQ14563 771 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 WSCD2Q2TBF2 565 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 PGS1Q32NB8 556 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms