RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 FNDC3BQ53EP0 1204 aaKnown RBP23.74■■□□□ 1.39
USP42-205ENST00000465073 MSANTD2Q6P1R3 559 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.74■■□□□ 1.39
USP42-205ENST00000465073 SLC35F5Q8WV83 523 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 IRGQQ8WZA9 623 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 SMARCE1Q969G3 411 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 IRX2Q9BZI1 471 aaPredicted RBP23.74■■□□□ 1.39
USP42-205ENST00000465073 TMEM245Q9H330 911 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 ABCB8Q9NUT2 735 aa23.74■■□□□ 1.39
USP42-205ENST00000465073 HLA-EP13747 358 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 LCP1P13796 627 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 DAOAP59103 153 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 MPP7Q5T2T1 576 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 TMEM270Q6UE05 265 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 IL27RAQ6UWB1 636 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 CHST9Q7L1S5 443 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 KIAA0907Q7Z7F0 614 aaPredicted RBP23.73■■□□□ 1.39
USP42-205ENST00000465073 AHI1Q8N157 1196 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 TFAP2BQ92481 460 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 FBRSQ9HAH7 460 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 HOOK1Q9UJC3 728 aaKnown RBP23.73■■□□□ 1.39
USP42-205ENST00000465073 GGA2Q9UJY4 613 aa23.73■■□□□ 1.39
USP42-205ENST00000465073 SRRM3A6NNA2 597 aaPredicted RBP23.72■■□□□ 1.39
USP42-205ENST00000465073 PMM2O15305 246 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 MSI1O43347 362 aaKnown RBP23.72■■□□□ 1.39
USP42-205ENST00000465073 ZNF883P0CG24 379 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 FMO5P49326 533 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 CNGA2Q16280 664 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 ADIPOR2Q86V24 386 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 CACUL1Q86Y37 369 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 UNC45BQ8IWX7 931 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 ENGASEQ8NFI3 743 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 CYB5D2Q8WUJ1 264 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 NT5C1BQ96P26 610 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 LHX5Q9H2C1 402 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 EIF2B4Q9UI10 523 aaKnown RBP23.72■■□□□ 1.39
USP42-205ENST00000465073 CKAP5Q14008 2032 aa23.72■■□□□ 1.39
USP42-205ENST00000465073 TRIM49BA6NDI0 452 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 PSMA7O14818 248 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 CER1O95813 267 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 IGLV3-27P01718 113 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 ATP5BP06576 529 aaKnown RBP23.71■■□□□ 1.39
USP42-205ENST00000465073 PABPC1P11940 636 aaKnown RBP23.71■■□□□ 1.39
USP42-205ENST00000465073 SLC11A2P49281 568 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 STIM1Q13586 685 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 FAM124AQ86V42 546 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 C1orf216Q8TAB5 229 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 CEP63Q96MT8 703 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 GAREM1Q9H706 876 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 RALYQ9UKM9 306 aaKnown RBP23.71■■□□□ 1.39
USP42-205ENST00000465073 PCDHB4Q9Y5E5 795 aa23.71■■□□□ 1.39
USP42-205ENST00000465073 IRAK2O43187 625 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 GABBR2O75899 941 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 DLDP09622 509 aaKnown RBP23.7■■□□□ 1.38
USP42-205ENST00000465073 MATKP42679 507 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 RGS7P49802 495 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 ZBTB16Q05516 673 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 RING1Q06587 406 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 STILQ15468 1287 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 PTPRNQ16849 979 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 PIK3R6Q5UE93 754 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 NUGGCQ68CJ6 796 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 PMF1Q6P1K2 205 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 GLRX5Q86SX6 157 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 ZNF557Q8N988 423 aaPredicted RBP23.7■■□□□ 1.38
USP42-205ENST00000465073 ADAMTS14Q8WXS8 1223 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 DHTKD1Q96HY7 919 aaPredicted RBP23.7■■□□□ 1.38
USP42-205ENST00000465073 TIGD1Q96MW7 591 aa23.7■■□□□ 1.38
USP42-205ENST00000465073 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.7■■□□□ 1.38
USP42-205ENST00000465073 CBFA2T3O75081 653 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 FTH1P19P0C7X4 201 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 BNC1Q01954 994 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 CETN1Q12798 172 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 MBLAC2Q68D91 279 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 GOLGA1Q92805 767 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 ERCC4Q92889 916 aaPredicted RBP23.69■■□□□ 1.38
USP42-205ENST00000465073 AZIN2Q96A70 460 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 HSFY1Q96LI6 401 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 IL21RQ9HBE5 538 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 PRSS16Q9NQE7 514 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 SUN2Q9UH99 717 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 PCOLCE2Q9UKZ9 415 aa23.69■■□□□ 1.38
USP42-205ENST00000465073 APOBEC2Q9Y235 224 aaKnown RBP23.69■■□□□ 1.38
USP42-205ENST00000465073 FBXO21O94952 628 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 LTFP02788 710 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 POLR2EP19388 210 aaKnown RBP23.68■■□□□ 1.38
USP42-205ENST00000465073 SGSHP51688 502 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 HLA-BQ31612 363 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 RFWD3Q6PCD5 774 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 PPM1KQ8N3J5 372 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 ZNF366Q8N895 744 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 TM7SF3Q9NS93 570 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 M0QYV0 167 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 RNF225M0QZC1 329 aaPredicted RBP23.68■■□□□ 1.38
USP42-205ENST00000465073 ACSL4O60488 711 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 TBL1XO60907 577 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 ACSL1P33121 698 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 PPP1R2P41236 205 aa23.68■■□□□ 1.38
USP42-205ENST00000465073 AFF3P51826 1226 aaKnown RBP23.68■■□□□ 1.38
USP42-205ENST00000465073 TBX4P57082 545 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms