RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 GPATCH2LQ9NWQ4 482 aa12.32□□□□□ -0.44
APTX-213ENST00000465003 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
APTX-213ENST00000465003 IMPACTQ9P2X3 320 aa12.32□□□□□ -0.44
APTX-213ENST00000465003 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
APTX-213ENST00000465003 VANGL2Q9ULK5 521 aa12.32□□□□□ -0.44
APTX-213ENST00000465003 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
APTX-213ENST00000465003 ANKRD62A6NC57 917 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 RCCD1A6NED2 376 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 TMEM110-MUSTN1A8MSY1 372 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 KCNU1A8MYU2 1149 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 NDUFA10O95299 355 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 ADH1CP00326 375 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 H2AFZP0C0S5 128 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 HOXC13P31276 330 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 CXCR3P49682 368 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 ZNF143P52747 638 aaPredicted RBP12.31□□□□□ -0.44
APTX-213ENST00000465003 ADGRF1Q5T601 910 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 FYB2Q5VWT5 728 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 H2AFVQ71UI9 128 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 BNIPLQ7Z465 357 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 C14orf80Q86SX3 495 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 LGI2Q8N0V4 545 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 ZNF564Q8TBZ8 553 aaPredicted RBP12.31□□□□□ -0.44
APTX-213ENST00000465003 CTNNBL1Q8WYA6 563 aaPredicted RBP12.31□□□□□ -0.44
APTX-213ENST00000465003 EZH1Q92800 747 aaPredicted RBP12.31□□□□□ -0.44
APTX-213ENST00000465003 PBXIP1Q96AQ6 731 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 HS3ST4Q9Y661 456 aa12.31□□□□□ -0.44
APTX-213ENST00000465003 CYP1A2P05177 515 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 GLULP15104 373 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 PTPN9P43378 593 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 SLC11A2P49281 568 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 MRE11P49959 708 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 GALK1P51570 392 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 SEC13P55735 322 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 NNTQ13423 1086 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 SMTNL2Q2TAL5 461 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 Q6ZS52 159 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 BTN2A3PQ96KV6 586 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 PEBP4Q96S96 227 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 DCLK3Q9C098 648 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 GOLPH3Q9H4A6 298 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 DNAJC17Q9NVM6 304 aaKnown RBP12.3□□□□□ -0.44
APTX-213ENST00000465003 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
APTX-213ENST00000465003 HYOU1Q9Y4L1 999 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 SCINQ9Y6U3 715 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 KIAA1549LQ6ZVL6 1849 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 FAM170BA6NMN3 283 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 FAM72CH0Y354 149 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TBL1XO60907 577 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 SRGAP2O75044 1071 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TULP3O75386 442 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 EGFP01133 1207 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 MYBL1P10243 752 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TACR2P21452 398 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 FECHP22830 423 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 HOXD9P28356 352 aaPredicted RBP12.3□□□□□ -0.44
APTX-213ENST00000465003 CHKAP35790 457 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 GJC1P36383 396 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 FAM72AQ5TYM5 149 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TXNRD3NBQ6F5E7 133 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 ASTLQ6HA08 431 aaPredicted RBP12.3□□□□□ -0.44
APTX-213ENST00000465003 FAM72DQ6L9T8 149 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
APTX-213ENST00000465003 ARCQ7LC44 396 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 FAM72BQ86X60 149 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 ATP6V0D2Q8N8Y2 350 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 OTUB2Q96DC9 234 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 PGAP3Q96FM1 320 aaPredicted RBP12.3□□□□□ -0.44
APTX-213ENST00000465003 ZNF830Q96NB3 372 aaPredicted RBP12.3□□□□□ -0.44
APTX-213ENST00000465003 LTB4R2Q9NPC1 389 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TRPV5Q9NQA5 729 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 MPP6Q9NZW5 540 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 TRIM10Q9UDY6 481 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 EPN1Q9Y6I3 576 aaPredicted RBP12.3□□□□□ -0.44
APTX-213ENST00000465003 DUSP10Q9Y6W6 482 aa12.3□□□□□ -0.44
APTX-213ENST00000465003 LRCH4O75427 683 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 CNTN5O94779 1100 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 TMEM253P0C7T8 217 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 CYLC1P35663 651 aaPredicted RBP12.29□□□□□ -0.44
APTX-213ENST00000465003 MAGEA1P43355 309 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 GAD2Q05329 585 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 AUHQ13825 339 aaKnown RBP12.29□□□□□ -0.44
APTX-213ENST00000465003 PPP2R5DQ14738 602 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 EMC10Q5UCC4 262 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 FSTL4Q6MZW2 842 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 PKN3Q6P5Z2 889 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 ZNF852Q6ZMS4 543 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 TMTC1Q8IUR5 882 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 ETFBKMTQ8IXQ9 262 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 FAM217AQ8IXS0 508 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
APTX-213ENST00000465003 CENPIQ92674 756 aaPredicted RBP12.29□□□□□ -0.44
APTX-213ENST00000465003 TMA16Q96EY4 203 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms