RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SLC2A11Q9BYW1 496 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 SENP6Q9GZR1 1112 aaPredicted RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 IFT122Q9HBG6 1241 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 XPNPEP3Q9NQH7 507 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 RIMS3Q9UJD0 308 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CNOT11Q9UKZ1 510 aaKnown RBP7.51□□□□□ -1.21
USP48-206ENST00000464577 PCDHB12Q9Y5F1 795 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 AP4B1Q9Y6B7 739 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CDY2AQ9Y6F7 541 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CDY1Q9Y6F8 540 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 DOCK5Q9H7D0 1870 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 PSME4Q14997 1843 aa7.51□□□□□ -1.21
USP48-206ENST00000464577 CLRN2A0PK11 232 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 C2CD4BA6NLJ0 364 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 TMEM114B3SHH9 223 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 TPP1O14773 563 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 OGTO15294 1046 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 PFDN1O60925 122 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 TOP3BO95985 862 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 FAM58BPP0C7Q3 252 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 SRGAP2CP0DJJ0 459 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 SRGAP2BP0DMP2 458 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 C7P10643 843 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 THRAP10827 490 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 RALBP11234 206 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 NCF2P19878 526 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 MX2P20592 715 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 GLDCP23378 1020 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 IL4RP24394 825 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 TNFSF9P41273 254 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 SERPINB8P50452 374 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 HDAC4P56524 1084 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 MTMR2Q13614 643 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 CCDC153Q494R4 210 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 SEZ6Q53EL9 994 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 BOLA3Q53S33 107 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 FAM102AQ5T9C2 384 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 SETD3Q86TU7 594 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 C10orf107Q8IVU9 208 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 NUP93Q8N1F7 819 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 NLGN1Q8N2Q7 840 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 MPP5Q8N3R9 675 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 PHTF2Q8N3S3 785 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 HIPK4Q8NE63 616 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ZFP28Q8NHY6 868 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ISL2Q96A47 359 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 NGLY1Q96IV0 654 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 CNDP1Q96KN2 507 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 C8orf37Q96NL8 207 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ZNF670Q9BS34 389 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 MRPL4Q9BYD3 311 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 NIFKQ9BYG3 293 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 CDH19Q9H159 772 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 COPG2Q9UBF2 871 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 CPSF3Q9UKF6 684 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 ZNF510Q9Y2H8 683 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 MAFBQ9Y5Q3 323 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 PRSS51A0A1B0GVH4 220 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 H0YJX3 145 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ZBTB14O43829 449 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 H2AFYO75367 372 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 RGS20O76081 388 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 MICAL2O94851 1124 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 TNNC2P02585 160 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 HMGCRP04035 888 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 HOXC6P09630 235 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ADSLP30566 484 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 ARRB2P32121 409 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 MAGEA12P43365 314 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 HK2P52789 917 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 EFNA5P52803 228 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 EMP3P54852 163 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 PTPN11Q06124 597 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 SFSWAPQ12872 951 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 USP4Q13107 963 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 CAPSQ13938 189 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 BAATQ14032 418 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 HERC3Q15034 1050 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ACBD5Q5T8D3 534 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 STYK1Q6J9G0 422 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 FAM83AQ86UY5 434 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ZNF410Q86VK4 478 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 PCDH19Q8TAB3 1148 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 TRPC4APQ8TEL6 797 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 RXFP2Q8WXD0 754 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 SLC39A7Q92504 469 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 DNAJC1Q96KC8 554 aaKnown RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 HAUS8Q9BT25 410 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 INO80BQ9C086 356 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 VPS33BQ9H267 617 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 PDZD7Q9H5P4 517 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 PCDH18Q9HCL0 1135 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 RNF146Q9NTX7 359 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 ADAM28Q9UKQ2 775 aa7.5□□□□□ -1.21
USP48-206ENST00000464577 CTDP1Q9Y5B0 961 aaPredicted RBP7.5□□□□□ -1.21
USP48-206ENST00000464577 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.49□□□□□ -1.21
USP48-206ENST00000464577 CCDC160A6NGH7 325 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms