RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 BAIAP3O94812 1187 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ERBB2P04626 1255 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 ITGAVP06756 1048 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 USP17L7P0C7H9 530 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 EPHA3P29320 983 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 HMOX2P30519 316 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 DAB2P98082 770 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 UBAP2Q5T6F2 1119 aaKnown RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 TEDDM1Q5T9Z0 273 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 MON1BQ7L1V2 547 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 PCYOX1LQ8NBM8 494 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 EMID1Q96A84 441 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 ZNF512Q96ME7 567 aaPredicted RBP9.31□□□□□ -0.92
HPS4-208ENST00000464362 NAT9Q9BTE0 207 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 SAR1AQ9NR31 198 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 PDGFCQ9NRA1 345 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 PNPOQ9NVS9 261 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 CD274Q9NZQ7 290 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 KIAA1257Q9ULG3 409 aa9.31□□□□□ -0.92
HPS4-208ENST00000464362 CLDN5O00501 218 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 RGL2O15211 777 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 RASSF9O75901 435 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 RHOBTB1O94844 696 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ALADP13716 330 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 C10orf120Q5SQS8 335 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 VWA5B1Q5TIE3 1220 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 PLEKHA7Q6IQ23 1121 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 TTC33Q6PID6 262 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 ZNF572Q7Z3I7 529 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 SIAH1Q8IUQ4 282 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 KYQ8NBH2 561 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 PGLYRP2Q96PD5 576 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ACO2Q99798 780 aaKnown RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 GOLGA2P5Q9HBQ8 144 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 MRPL40Q9NQ50 206 aaKnown RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 CASS4Q9NQ75 786 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 XPNPEP3Q9NQH7 507 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 MYH15Q9Y2K3 1946 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ARHGEF37A1IGU5 675 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 C2CD2LO14523 706 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 PAPSS1O43252 624 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 C4BPAP04003 597 aaKnown RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 RPS12P25398 132 aaKnown RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 ZNF143P52747 638 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 INPP5AQ14642 412 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 PPP1R26Q5T8A7 1209 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 ARMCX6Q7L4S7 300 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 MIER2Q8N344 545 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 DNERQ8NFT8 737 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 SEPHS2Q99611 448 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 FRMD8P1Q9BZ68 369 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 ULBP1Q9BZM6 244 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 WDR55Q9H6Y2 383 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 NRDE2Q9H7Z3 1164 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ZNF395Q9H8N7 513 aaPredicted RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 NMRK1Q9NWW6 199 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 BTBD7Q9P203 1132 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ACTL7BQ9Y614 415 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ADGRA3Q8IWK6 1321 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 TADA2AO75478 443 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 YBX3P16989 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
HPS4-208ENST00000464362 CDKN2BP42772 138 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 GRIK4Q16099 956 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 KHDC1Q4VXA5 237 aaKnown RBP9.3□□□□□ -0.92
HPS4-208ENST00000464362 ZRANB3Q5FWF4 1079 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 PPM1JQ5JR12 505 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 PIGZQ86VD9 579 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 ZNF516Q92618 1163 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 NMRAL1Q9HBL8 299 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 CRYL1Q9Y2S2 319 aa9.3□□□□□ -0.92
HPS4-208ENST00000464362 TGFB3P10600 412 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ZNF23P17027 643 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 PSMC3P17980 439 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ATP4AP20648 1035 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 CCR1P32246 355 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 STX5Q13190 355 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 SPRED3Q2MJR0 410 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ZNF484Q5JVG2 852 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 LRRC38Q5VT99 294 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 RNF220Q5VTB9 566 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 DNAJC14Q6Y2X3 702 aaPredicted RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 ZBTB49Q6ZSB9 765 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 FAM43BQ6ZT52 329 aaPredicted RBP9.29□□□□□ -0.92
HPS4-208ENST00000464362 TMC7Q7Z402 723 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ERO1BQ86YB8 467 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 CATSPER1Q8NEC5 780 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 SNX19Q92543 992 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ASB7Q9H672 318 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 NCKIPSDQ9NZQ3 722 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 ZMYM2Q9UBW7 1377 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 KCPQ6ZWJ8 1503 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 MYO1GB0I1T2 1018 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 MGEA5O60502 916 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 FKBP6O75344 327 aa9.29□□□□□ -0.92
HPS4-208ENST00000464362 PAEPP09466 180 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms