RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 STON1Q9Y6Q2 735 aa13.96□□□□□ -0.18
COMMD3-205ENST00000463688 HELZP42694 1942 aaKnown RBP13.96□□□□□ -0.18
COMMD3-205ENST00000463688 F5H5T6 163 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 SLC30A4O14863 429 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 ADAM23O75077 832 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 DLDP09622 509 aaKnown RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 PABPC1P11940 636 aaKnown RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 NOS2P35228 1153 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 SRSF5Q13243 272 aaKnown RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 FILIP1LQ4L180 1135 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 DCAF6Q58WW2 860 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 WDR45BQ5MNZ6 344 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 PLA2G2CQ5R387 149 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 DAB2IPQ5VWQ8 1189 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 RNF219Q5W0B1 726 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 LYSMD4Q5XG99 296 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 EGFLAMQ63HQ2 1017 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 ERICH1Q86X53 443 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 MFN1Q8IWA4 741 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 FIBINQ8TAL6 211 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 C18orf8Q96DM3 657 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 PCMTD1Q96MG8 357 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 ZSWIM1Q9BR11 485 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 PRDM16Q9HAZ2 1276 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 EVLQ9UI08 416 aaPredicted RBP13.95□□□□□ -0.18
COMMD3-205ENST00000463688 GGA2Q9UJY4 613 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 WDR87Q6ZQQ6 2873 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 DMDP11532 3685 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 CFAP54Q96N23 3096 aa13.95□□□□□ -0.18
COMMD3-205ENST00000463688 COL4A3Q01955 1670 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 BECN2A8MW95 431 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 PRRT4C9JH25 899 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 PAPSS1O43252 624 aaPredicted RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 TBL1XO60907 577 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 TRUB2O95900 331 aaKnown RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 CYP11B1P15538 503 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 HOXD9P28356 352 aaPredicted RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 STAT1P42224 750 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 SLC6A3Q01959 620 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 ENPP2Q13822 863 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 MIIPQ5JXC2 388 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 BRMS1LQ5PSV4 323 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 OR6B2Q6IFH4 312 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 ARCQ7LC44 396 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 NEK11Q8NG66 645 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 NDRG1Q92597 394 aaKnown RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 RMDN1Q96DB5 314 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 SLC39A13Q96H72 371 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 NUP58Q9BVL2 599 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 TPSD1Q9BZJ3 242 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 SAMSN1Q9NSI8 373 aaKnown RBP13.94□□□□□ -0.18
COMMD3-205ENST00000463688 NAALADL1Q9UQQ1 740 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 SPTBN4Q9H254 2564 aa13.94□□□□□ -0.18
COMMD3-205ENST00000463688 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 A0A1W2PQF6 199 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 LRRC10BA6NIK2 292 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 KCNU1A8MYU2 1149 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 H0Y626 953 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 MSI1O43347 362 aaKnown RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 SRPRAP08240 638 aaKnown RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 TGM1P22735 817 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 CDH5P33151 784 aaPredicted RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 MATKP42679 507 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 RPL6Q02878 288 aaKnown RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 MAP7D1Q3KQU3 841 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 TTC31Q49AM3 519 aaPredicted RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 MS4A13Q5J8X5 152 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 CDKAL1Q5VV42 579 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 LRRC31Q6UY01 552 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 CHST9Q7L1S5 443 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 SLC47A2Q86VL8 602 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 CADM4Q8NFZ8 388 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 OR2T3Q8NH03 318 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 SIPA1Q96FS4 1042 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 SLC2A13Q96QE2 648 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 RETREG1Q9H6L5 497 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 DDIT4Q9NX09 232 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 CACNA2D2Q9NY47 1150 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.93□□□□□ -0.18
COMMD3-205ENST00000463688 CALCOCO1Q9P1Z2 691 aa13.93□□□□□ -0.18
COMMD3-205ENST00000463688 ANKRD62A6NC57 917 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 F8VZ95 297 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 PIK3R2O00459 728 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 TSPAN3O60637 253 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 EPHX1P07099 455 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 SYPP08247 313 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 GABRG2P18507 467 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 CD6P30203 668 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 ATXN3P54252 364 aaPredicted RBP13.92□□□□□ -0.18
COMMD3-205ENST00000463688 CCDC15Q0P6D6 951 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 GEN1Q17RS7 908 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 DUOXA1Q1HG43 343 aa13.92□□□□□ -0.18
COMMD3-205ENST00000463688 RNF43Q68DV7 783 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms