RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF461Q8TAF7 563 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 SENP8Q96LD8 212 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 C9orf72Q96LT7 481 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 FAM118BQ9BPY3 351 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 NT5C1AQ9BXI3 368 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 SYNCQ9H7C4 482 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 SFXN1Q9H9B4 322 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 SSU72Q9NP77 194 aaKnown RBP10.27□□□□□ -0.77
PTPRD-207ENST00000463477 SAYSD1Q9NPB0 183 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 MAN1C1Q9NR34 630 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 AGAP1Q9UPQ3 857 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 CDY1Q9Y6F8 540 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 C5orf42Q9H799 3197 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 ARHGEF37A1IGU5 675 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 C2CD4BA6NLJ0 364 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 KPNA7A9QM74 516 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 M0QYV0 167 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 SGK1O00141 431 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 SPTLC1O15269 473 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 SNX3O60493 162 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CST8O60676 142 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 ABLIM3O94929 683 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CYP11A1P05108 521 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 SPATA31D3P0C874 917 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 GPD1P21695 349 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 MIPP30301 263 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 STIP1P31948 543 aaKnown RBP10.26□□□□□ -0.77
PTPRD-207ENST00000463477 SCNN1AP37088 669 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-207ENST00000463477 TFDP2Q14188 446 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CBX2Q14781 532 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-207ENST00000463477 PDK2Q15119 407 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CCDC38Q502W7 563 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 PKDCCQ504Y2 493 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 EFHC2Q5JST6 749 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 RNF187Q5TA31 235 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-207ENST00000463477 DSTYKQ6XUX3 929 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 RGS9BPQ6ZS82 235 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 SPATA31D4Q6ZUB0 917 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 TRABD2AQ86V40 505 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 ZDHHC17Q8IUH5 632 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 LRRC52Q8N7C0 313 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 C12orf76Q8N812 135 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-207ENST00000463477 NAT8LQ8N9F0 302 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 STK32AQ8WU08 396 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 TEKT4Q8WW24 435 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 GRAMD1AQ96CP6 724 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 MAGEB18Q96M61 343 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 RIPOR3Q96MK2 946 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 TBCBQ99426 244 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 PHF7Q9BWX1 381 aaPredicted RBP10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CYLDQ9NQC7 956 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 ZDHHC7Q9NXF8 308 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 NKIRAS1Q9NYS0 192 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 TJP2Q9UDY2 1190 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 HMGXB4Q9UGU5 601 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 USP18Q9UMW8 372 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CAPN7Q9Y6W3 813 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 VWA8A3KMH1 1905 aa10.26□□□□□ -0.77
PTPRD-207ENST00000463477 CCDC195A0A1B0GUA6 201 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 EXOC1LA0A1B0GW35 172 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 MCF2LO15068 1137 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 DNAJC8O75937 253 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ODC1P11926 461 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 GCAP28676 217 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 PHBP35232 272 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 MTHFRP42898 656 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 NDST1P52848 882 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ARL4CP56559 192 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ZP2Q05996 745 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 HIF1AQ16665 826 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CTXN3Q4LDR2 81 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 RARS2Q5T160 578 aaKnown RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 TPGS2Q68CL5 300 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ZNF280DQ6N043 979 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 TMC5Q6UXY8 1006 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CYP4V2Q6ZWL3 525 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ARCQ7LC44 396 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 UNC93AQ86WB7 457 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 SUGP1Q8IWZ8 645 aaKnown RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CCDC13Q8IYE1 715 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CYP4X1Q8N118 509 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 GJD3Q8N144 294 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 KCTD6Q8NC69 237 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 DYDC1Q8WWB3 177 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 HEXIM2Q96MH2 286 aaKnown RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 PWWP2AQ96N64 755 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 NECAB3Q96P71 396 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 TMEM121Q9BTD3 319 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 APOL5Q9BWW9 433 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 SLC4A5Q9BY07 1137 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 FRMD8Q9BZ67 464 aaPredicted RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 ZWILCHQ9H900 591 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 DNAJC17Q9NVM6 304 aaKnown RBP10.25□□□□□ -0.77
PTPRD-207ENST00000463477 CTNNAL1Q9UBT7 734 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 FBXW11Q9UKB1 542 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 DSEQ9UL01 958 aa10.25□□□□□ -0.77
PTPRD-207ENST00000463477 MAFFQ9ULX9 164 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms