RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 FAM124AQ86V42 546 aa20.64■□□□□ 0.89
VARS-221ENST00000463184 BAHD1Q8TBE0 780 aaPredicted RBP20.64■□□□□ 0.89
VARS-221ENST00000463184 NDRG1Q92597 394 aaKnown RBP20.64■□□□□ 0.89
VARS-221ENST00000463184 CDC6Q99741 560 aa20.64■□□□□ 0.89
VARS-221ENST00000463184 CCDC86Q9H6F5 360 aaKnown RBP20.64■□□□□ 0.89
VARS-221ENST00000463184 FBRSQ9HAH7 460 aa20.64■□□□□ 0.89
VARS-221ENST00000463184 TSPAN16Q9UKR8 245 aa20.64■□□□□ 0.89
VARS-221ENST00000463184 DSPP15924 2871 aaKnown RBP20.63■□□□□ 0.89
VARS-221ENST00000463184 A0A1B0GVT2 93 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 TULP2O00295 520 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 TSPAN3O60637 253 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 ACSL1P33121 698 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 CSNK1EP49674 416 aaKnown RBP20.63■□□□□ 0.89
VARS-221ENST00000463184 ZBTB16Q05516 673 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 BST2Q10589 180 aaKnown RBP20.63■□□□□ 0.89
VARS-221ENST00000463184 TEAD4Q15561 434 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 ADGRF1Q5T601 910 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 BSPRYQ5W0U4 402 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 KIAA0907Q7Z7F0 614 aaPredicted RBP20.63■□□□□ 0.89
VARS-221ENST00000463184 AHI1Q8N157 1196 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.63■□□□□ 0.89
VARS-221ENST00000463184 RHBDD1Q8TEB9 315 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 CYB5D2Q8WUJ1 264 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 SNX19Q92543 992 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 C6orf106Q9H6K1 298 aaPredicted RBP20.63■□□□□ 0.89
VARS-221ENST00000463184 OSGEPQ9NPF4 335 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 ABCC13Q9NSE7 274 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 SFMBT1Q9UHJ3 866 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 GPSM3Q9Y4H4 160 aa20.63■□□□□ 0.89
VARS-221ENST00000463184 ZNF202O95125 648 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 YWHAEP62258 255 aaKnown RBP20.62■□□□□ 0.89
VARS-221ENST00000463184 ADIGQ0VDE8 80 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 ADIPOR2Q86V24 386 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 SCML4Q8N228 414 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 KCTD13Q8WZ19 329 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 EEF2KMTQ96G04 330 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 GBP4Q96PP9 640 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 BTBD1Q9H0C5 482 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 CNGB3Q9NQW8 809 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 ABCB8Q9NUT2 735 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 GGA2Q9UJY4 613 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.62■□□□□ 0.89
VARS-221ENST00000463184 COQ4Q9Y3A0 265 aa20.62■□□□□ 0.89
VARS-221ENST00000463184 PLXNB3Q9ULL4 1909 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 YJEFN3A6XGL0 299 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 E7ENQ6 273 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 DKK1O94907 266 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 ATP5BP06576 529 aaKnown RBP20.61■□□□□ 0.89
VARS-221ENST00000463184 PABPC1P11940 636 aaKnown RBP20.61■□□□□ 0.89
VARS-221ENST00000463184 CUL2Q13617 745 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 ACAP1Q15027 740 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 PTPRNQ16849 979 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 KIF19Q2TAC6 998 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 MPP7Q5T2T1 576 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 TMPRSS7Q7RTY8 843 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 SIX6OS1Q8N1H7 587 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 EDEM1Q92611 657 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 CCDC34Q96HJ3 373 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 IRX2Q9BZI1 471 aaPredicted RBP20.61■□□□□ 0.89
VARS-221ENST00000463184 PRSS16Q9NQE7 514 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 TOR4AQ9NXH8 423 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 SUN2Q9UH99 717 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 KIAA1257Q9ULG3 409 aa20.61■□□□□ 0.89
VARS-221ENST00000463184 BAHCC1Q9P281 2608 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
VARS-221ENST00000463184 SEMA4FO95754 770 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 DNTTP04053 509 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 DLDP09622 509 aaKnown RBP20.6■□□□□ 0.89
VARS-221ENST00000463184 SETSIPP0DME0 302 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 VDRP11473 427 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 CD19P15391 556 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 GRIA4P48058 902 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 UBE2HP62256 183 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 RPS14P62263 151 aaKnown RBP20.6■□□□□ 0.89
VARS-221ENST00000463184 CBWD6Q4V339 395 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 CBWD3Q5JTY5 395 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 CBWD5Q5RIA9 395 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 TCERG1LQ5VWI1 586 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 MBLAC2Q68D91 279 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 FMR1NBQ8N0W7 255 aaPredicted RBP20.6■□□□□ 0.89
VARS-221ENST00000463184 ZNF366Q8N895 744 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 ZNF557Q8N988 423 aaPredicted RBP20.6■□□□□ 0.89
VARS-221ENST00000463184 ENGASEQ8NFI3 743 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 UBA3Q8TBC4 463 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 GOLGA1Q92805 767 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 SGK2Q9HBY8 427 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 ANKRD6Q9Y2G4 727 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 SNX11Q9Y5W9 270 aa20.6■□□□□ 0.89
VARS-221ENST00000463184 ATXN1LP0C7T5 689 aaKnown RBP20.59■□□□□ 0.89
VARS-221ENST00000463184 POLR2EP19388 210 aaKnown RBP20.59■□□□□ 0.89
VARS-221ENST00000463184 TTC31Q49AM3 519 aaPredicted RBP20.59■□□□□ 0.89
VARS-221ENST00000463184 DCAF17Q5H9S7 520 aaPredicted RBP20.59■□□□□ 0.89
VARS-221ENST00000463184 UNC45BQ8IWX7 931 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 SMYD4Q8IYR2 804 aaPredicted RBP20.59■□□□□ 0.89
VARS-221ENST00000463184 IGSF8Q969P0 613 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 BIRC7Q96CA5 298 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 TM9SF3Q9HD45 589 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 SLCO1B1Q9Y6L6 691 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 NUMA1Q14980 2115 aa20.59■□□□□ 0.89
VARS-221ENST00000463184 ANKRD11Q6UB99 2663 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms