RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 GEN1Q17RS7 908 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 PLEKHG6Q3KR16 790 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 MIIPQ5JXC2 388 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 CCDC183Q5T5S1 534 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 FYB2Q5VWT5 728 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 ARHGAP17Q68EM7 881 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 DPY19L2P1Q6NXN4 242 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 KIAA1324Q6UXG2 1013 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 C11orf57Q6ZUT1 292 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 NUDT18Q6ZVK8 323 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 CCDC186Q7Z3E2 898 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 METTL3Q86U44 580 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 NAXDQ8IW45 347 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 CCDC150Q8NCX0 1101 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 C1orf216Q8TAB5 229 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 BAHD1Q8TBE0 780 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 ADAMTS14Q8WXS8 1223 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 DNASE2BQ8WZ79 361 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 JAKMIP2Q96AA8 810 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 CYFIP2Q96F07 1278 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 TMEM176AQ96HP8 235 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 NT5C1BQ96P26 610 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 THAP9Q9H5L6 903 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 PNPLA8Q9NP80 782 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 SAMSN1Q9NSI8 373 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 WSB2Q9NYS7 404 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 WDR35Q9P2L0 1181 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 THAP10Q9P2Z0 257 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 LSM7Q9UK45 103 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 AJAP1Q9UKB5 411 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLC27A6Q9Y2P4 619 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 GPSM3Q9Y4H4 160 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 USP3Q9Y6I4 520 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLCO1B1Q9Y6L6 691 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 STON1Q9Y6Q2 735 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 COL5A1P20908 1838 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 GOLGA6L22H0YM25 854 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 RNF225M0QZC1 329 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TULP2O00295 520 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 CALCAP01258 141 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 IGLV3-19P01714 112 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 SYPP08247 313 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TBXAS1P24557 533 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 CD6P30203 668 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 COPAP53621 1224 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 APBA1Q02410 837 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 GCNT1Q02742 428 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 SCAPQ12770 1279 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLC14A1Q13336 389 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 HNRNPDQ14103 355 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TRIP6Q15654 476 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 HSP90AA4PQ58FG1 418 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 CT47A1Q5JQC4 288 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TMEM215Q68D42 235 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 GJB7Q6PEY0 223 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 GLRX5Q86SX6 157 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 PPM1KQ8N3J5 372 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZNF276Q8N554 614 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZCCHC9Q8N567 271 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TTC39CQ8N584 583 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 PNPLA1Q8N8W4 532 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TOE1Q96GM8 510 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 PIWIL1Q96J94 861 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZSWIM1Q9BR11 485 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 CRACR2AQ9BSW2 395 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 DUSP16Q9BY84 665 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 PRDM16Q9HAZ2 1276 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 IL21RQ9HBE5 538 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 SIX2Q9NPC8 291 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 TOR4AQ9NXH8 423 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 SUSD2Q9UGT4 822 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 DACH1Q9UI36 760 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 PCOLCE2Q9UKZ9 415 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 CLEC4EQ9ULY5 219 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 FNDC3AQ9Y2H6 1198 aaKnown RBP8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 NFE2L3Q9Y4A8 694 aa8.29□□□□□ -1.08
CDC42BPA-210ENST00000462553 A0A1B0GTW7 788 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 GTPBP10A4D1E9 387 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 C2orf72A6NCS6 295 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 MEI4A8MW99 385 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 O00370 1275 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 NDUFS2O75306 463 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 DKK1O94907 266 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 NCAM1P13591 858 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLC9A1P19634 815 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 PRKCHP24723 683 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 MTIF2P46199 727 aaKnown RBP8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 PLA2G4AP47712 749 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 TPMTP51580 245 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 ACAP1Q15027 740 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 MAN2A1Q16706 1144 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 GOLGA7BQ2TAP0 167 aa8.28□□□□□ -1.08
CDC42BPA-210ENST00000462553 RAB41Q5JT25 222 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms