RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 TTC31Q49AM3 519 aaPredicted RBP9.22□□□□□ -0.93
LDB1-203ENST00000461873 MPP7Q5T2T1 576 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 PSAPL1Q6NUJ1 521 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 SND1Q7KZF4 910 aaKnown RBP eCLIP9.22□□□□□ -0.93
LDB1-203ENST00000461873 CHST9Q7L1S5 443 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 CARNMT1Q8N4J0 409 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 STK32AQ8WU08 396 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 ZNF606Q8WXB4 792 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 TFAP2BQ92481 460 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 SNX19Q92543 992 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 KAT5Q92993 513 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 HSPA12BQ96MM6 686 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 ACOX2Q99424 681 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 NUP58Q9BVL2 599 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
LDB1-203ENST00000461873 MIR1-1HGQ9H1L0 117 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 THAP9Q9H5L6 903 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 FAM204AQ9H8W3 233 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 FBRSQ9HAH7 460 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 POPDC2Q9HBU9 364 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 APEX2Q9UBZ4 518 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 EVLQ9UI08 416 aaPredicted RBP9.22□□□□□ -0.93
LDB1-203ENST00000461873 GGA2Q9UJY4 613 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 ANGPTL2Q9UKU9 493 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 TLR6Q9Y2C9 796 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 PCDHB9Q9Y5E1 797 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 WDR87Q6ZQQ6 2873 aa9.22□□□□□ -0.93
LDB1-203ENST00000461873 ATXN2Q99700 1313 aaKnown RBP9.22□□□□□ -0.93
LDB1-203ENST00000461873 SYNJ2BP-COX16A0A087WUM0 186 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 IGHV1OR15-9A0A0B4J2B8 117 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 A0A1W2PQF6 199 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 LNP1A1A4G5 178 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 GTPBP10A4D1E9 387 aaKnown RBP9.21□□□□□ -0.94
LDB1-203ENST00000461873 ANTXRLA6NF34 631 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 F5H5T6 163 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 KCNK5O95279 499 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 PABPC1P11940 636 aaKnown RBP9.21□□□□□ -0.94
LDB1-203ENST00000461873 ENGP17813 658 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 BMP6P22004 513 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 ITPKAP23677 461 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 IL12RB1P42701 662 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 PTGER3P43115 390 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 OXCT1P55809 520 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 YWHAZP63104 245 aaKnown RBP9.21□□□□□ -0.94
LDB1-203ENST00000461873 RAPGEF1Q13905 1077 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 MEA1Q16626 185 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 MAN2A1Q16706 1144 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 FUT11Q495W5 492 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 EFHC1Q5JVL4 640 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 RABGAP1LQ5R372 815 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 KIAA1211LQ6NV74 962 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 MSANTD2Q6P1R3 559 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 SLC23A3Q6PIS1 610 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 TRIM65Q6PJ69 517 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 CACUL1Q86Y37 369 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 UBR7Q8N806 425 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 OR2T3Q8NH03 318 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 AZIN2Q96A70 460 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 TOE1Q96GM8 510 aaKnown RBP9.21□□□□□ -0.94
LDB1-203ENST00000461873 MRGPRX1Q96LB2 322 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.94
LDB1-203ENST00000461873 GPR174Q9BXC1 333 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 ABCB8Q9NUT2 735 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.21□□□□□ -0.94
LDB1-203ENST00000461873 COX16Q9P0S2 106 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 PAXBP1Q9Y5B6 917 aa9.21□□□□□ -0.94
LDB1-203ENST00000461873 PATE3B3GLJ2 98 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 HAX1O00165 279 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 ASLP04424 464 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 SERPINF2P08697 491 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 DLDP09622 509 aaKnown RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 CEACAM1P13688 526 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 SLC9A1P19634 815 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 HOXD9P28356 352 aaPredicted RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 CCR1P32246 355 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 GPD2P43304 727 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 NNTQ13423 1086 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 HNRNPDQ14103 355 aaKnown RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 TEAD4Q15561 434 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 VWA3BQ502W6 1294 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 PKDCCQ504Y2 493 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 DCAF6Q58WW2 860 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 SH3PXD2AQ5TCZ1 1133 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 PIK3R6Q5UE93 754 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 MBLAC2Q68D91 279 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 DENND1BQ6P3S1 775 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 RFWD3Q6PCD5 774 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 ADAT2Q7Z6V5 191 aaKnown RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 METTL3Q86U44 580 aaKnown RBP9.2□□□□□ -0.94
LDB1-203ENST00000461873 FAM124AQ86V42 546 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 CHSY1Q86X52 802 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 FAM217AQ8IXS0 508 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 FRMD1Q8N878 549 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 CADM4Q8NFZ8 388 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 LMO3Q8TAP4 145 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 ADAM32Q8TC27 787 aa9.2□□□□□ -0.94
LDB1-203ENST00000461873 CLEC4CQ8WTT0 213 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms