RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 ADAT2Q7Z6V5 191 aaKnown RBP12.4□□□□□ -0.42
HCFC1-204ENST00000461098 TADA2BQ86TJ2 420 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 CACTIN-AS1Q8N1I8 211 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 EID2Q8N6I1 236 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
HCFC1-204ENST00000461098 RFFLQ8WZ73 363 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 MYO19Q96H55 970 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 MTG2Q9H4K7 406 aa12.4□□□□□ -0.42
HCFC1-204ENST00000461098 UBE4BO95155 1302 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 EXOC3O60645 756 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 ASS1P00966 412 aaKnown RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 DNTTP04053 509 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 ITGAVP06756 1048 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 RALAP11233 206 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 SGSHP51688 502 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 C21orf59P57076 290 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 CCDC173Q0VFZ6 552 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 BNIP3Q12983 259 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 TBC1D25Q3MII6 688 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 C1orf220Q5T0J3 134 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 SFMBT2Q5VUG0 894 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 CHST9Q7L1S5 443 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 BHLHA9Q7RTU4 235 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 WFDC5Q8TCV5 224 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 CDK5RAP1Q96SZ6 601 aaKnown RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 C7orf25Q9BPX7 421 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 DUSP16Q9BY84 665 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 RSPH9Q9H1X1 276 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 FBRSQ9HAH7 460 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 APOBEC3GQ9HC16 384 aaKnown RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 ABCB8Q9NUT2 735 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 DMAC2Q9NW81 257 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 MARCH2Q9P0N8 246 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
HCFC1-204ENST00000461098 STOML2Q9UJZ1 356 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 PLA2G4CQ9UP65 541 aa12.39□□□□□ -0.43
HCFC1-204ENST00000461098 SLC12A8A0AV02 714 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 VPS37CA5D8V6 355 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 PYCARD-AS1I3L0S3 204 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 STX6O43752 255 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 RPN1P04843 607 aaKnown RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 DLDP09622 509 aaKnown RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 P4HA1P13674 534 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 ABCB4P21439 1286 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 EPHA8P29322 1005 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 CASP1P29466 404 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 ASIC1P78348 528 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 INSM1Q01101 510 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 ARID5AQ03989 594 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 KCNH2Q12809 1159 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 MPPE1Q53F39 396 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 RAB41Q5JT25 222 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 NCEH1Q6PIU2 408 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 SV2AQ7L0J3 742 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 FMNL3Q8IVF7 1028 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 DCBLD1Q8N8Z6 715 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 WFIKKN2Q8TEU8 576 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 TMEM174Q8WUU8 243 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 TAF4BQ92750 862 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 WBP1Q96G27 269 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 LMLNQ96KR4 655 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 ARID3AQ99856 593 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 NEUROG2Q9H2A3 272 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 SLC39A2Q9NP94 309 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 GGA2Q9UJY4 613 aa12.38□□□□□ -0.43
HCFC1-204ENST00000461098 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.38□□□□□ -0.43
HCFC1-204ENST00000461098 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 FAM47DPA6NHR8 397 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 PABPC1P11940 636 aaKnown RBP12.37□□□□□ -0.43
HCFC1-204ENST00000461098 CD38P28907 300 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 CD70P32970 193 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 RXRGP48443 463 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 ILKQ13418 452 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-204ENST00000461098 PKDCCQ504Y2 493 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 MBLAC2Q68D91 279 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 ZNF776Q68DI1 518 aaPredicted RBP12.37□□□□□ -0.43
HCFC1-204ENST00000461098 UNC13DQ70J99 1090 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
HCFC1-204ENST00000461098 AHI1Q8N157 1196 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 GOLGA1Q92805 767 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 NT5C1AQ9BXI3 368 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 LRRC27Q9C0I9 530 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 FBXL12Q9NXK8 326 aa12.37□□□□□ -0.43
HCFC1-204ENST00000461098 CLSTN1O94985 981 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 HLA-DRAP01903 254 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 CKMT2P17540 419 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 GLDCP23378 1020 aa12.36□□□□□ -0.43
HCFC1-204ENST00000461098 ACP1P24666 158 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms