RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ATP6V0D2Q8N8Y2 350 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 RNF34Q969K3 372 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 SHDQ96IW2 340 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 BTN2A3PQ96KV6 586 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 PRMT1Q99873 361 aaKnown RBP13.3□□□□□ -0.28
COL18A1-206ENST00000459895 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 TKTL2Q9H0I9 626 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 RBM12Q9NTZ6 932 aaKnown RBP13.3□□□□□ -0.28
COL18A1-206ENST00000459895 SNX10Q9Y5X0 201 aa13.3□□□□□ -0.28
COL18A1-206ENST00000459895 DOCK4Q8N1I0 1966 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 PRR33A8MZF0 331 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 TRIM24O15164 1050 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 TULP3O75386 442 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 PAGE1O75459 146 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 ENDOD1O94919 500 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 SLC2A3P11169 496 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 GLULP15104 373 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 AOC1P19801 751 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 TACR2P21452 398 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 PSMA2P25787 234 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 CHKAP35790 457 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 SLC6A11P48066 632 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 NR1H3Q13133 447 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM196Q5HYL7 178 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 ADGRF1Q5T601 910 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 RNF43Q68DV7 783 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 ZNF852Q6ZMS4 543 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 Q6ZS52 159 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 SND1Q7KZF4 910 aaKnown RBP eCLIP13.29□□□□□ -0.285e-8■■■□□ 14.6
COL18A1-206ENST00000459895 LGI2Q8N0V4 545 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 FBXL6Q8N531 539 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM105Q8N8V8 129 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 HJURPQ8NCD3 748 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 WFDC5Q8TCV5 224 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 CENPIQ92674 756 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 CD101Q93033 1021 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 PBXIP1Q96AQ6 731 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 BTBD6Q96KE9 485 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 P2RY13Q9BPV8 354 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 CNPY3Q9BT09 278 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.29□□□□□ -0.28
COL18A1-206ENST00000459895 ANAPC7Q9UJX3 599 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 HS3ST4Q9Y661 456 aa13.29□□□□□ -0.28
COL18A1-206ENST00000459895 ZNF318Q5VUA4 2279 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 F5H5T6 163 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 PI15O43692 258 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 GPR37L1O60883 481 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 LCA5LO95447 670 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 EGFP01133 1207 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 H2AFZP0C0S5 128 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM253P0C7T8 217 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 EIF2DP41214 584 aaKnown RBP13.28□□□□□ -0.28
COL18A1-206ENST00000459895 RPS24P62847 133 aaKnown RBP13.28□□□□□ -0.28
COL18A1-206ENST00000459895 CCINQ13939 588 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 C1orf228Q6PIY5 440 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 H2AFVQ71UI9 128 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 BMP8AQ7Z5Y6 402 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 CPNE8Q86YQ8 564 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 ACRBPQ8NEB7 543 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 FNIP1Q8TF40 1166 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 DDI1Q8WTU0 396 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 AZIN2Q96A70 460 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 PEBP4Q96S96 227 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 BAG1Q99933 345 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-206ENST00000459895 C1QTNF1Q9BXJ1 281 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 MRPL47Q9HD33 250 aaKnown RBP13.28□□□□□ -0.28
COL18A1-206ENST00000459895 CLEC4EQ9ULY5 219 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 NEU3Q9UQ49 428 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 PAXBP1Q9Y5B6 917 aa13.28□□□□□ -0.28
COL18A1-206ENST00000459895 ANTXRLA6NF34 631 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 STK25O00506 426 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 TBL1XO60907 577 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 LRCH4O75427 683 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 NDUFA10O95299 355 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 F9P00740 461 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CYBBP04839 570 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 DCNP07585 359 aaKnown RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CHRM1P11229 460 aaPredicted RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 TCF4P15884 667 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 MPPE1Q53F39 396 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 ARTNQ5T4W7 220 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 ASTLQ6HA08 431 aaPredicted RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 GRAMD4Q6IC98 578 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CYP4V2Q6ZWL3 525 aaPredicted RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 C14orf80Q86SX3 495 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 SUGP1Q8IWZ8 645 aaKnown RBP13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 ZNF683Q8IZ20 524 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 CFAP52Q8N1V2 620 aa13.27□□□□□ -0.29
COL18A1-206ENST00000459895 ARFGAP1Q8N6T3 406 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms