RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 DCDC2BA2VCK2 349 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 ANTXRLA6NF34 631 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 THAP12O43422 761 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 GDF9O60383 454 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SYNCRIPO60506 623 aaKnown RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 LETM1O95202 739 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 IGLV3-25P01717 112 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 ASLP04424 464 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 FYNP06241 537 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SERPINF2P08697 491 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SLC9A1P19634 815 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 CSRP1P21291 193 aaKnown RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SCNN1AP37088 669 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 OXCT1P55809 520 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 RPL6Q02878 288 aaKnown RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 ARID5AQ03989 594 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SFSWAPQ12872 951 aaKnown RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 EIF4EBP2Q13542 120 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 CAMK2GQ13555 558 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SLC12A1Q13621 1099 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 ZNF234Q14588 700 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 FAM133BQ5BKY9 247 aaKnown RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 PPM1JQ5JR12 505 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 WDR45BQ5MNZ6 344 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SYCP2LQ5T4T6 812 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 TTC39BQ5VTQ0 682 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 KIAA1211LQ6NV74 962 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 CCDC117Q8IWD4 279 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SCUBE3Q8IX30 993 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 FIBINQ8TAL6 211 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 DQX1Q8TE96 717 aaKnown RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 P2RY11Q96G91 374 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 BTN2A3PQ96KV6 586 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 FCRL2Q96LA5 508 aaPredicted RBP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 PPP1R9BQ96SB3 815 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 MIS12Q9H081 205 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 TMEM245Q9H330 911 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 ST7Q9NRC1 585 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.4□□□□□ -0.74
HDLBP-228ENST00000459788 CACNA2D2Q9NY47 1150 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SUN2Q9UH99 717 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SLC12A6Q9UHW9 1150 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SCML1Q9UN30 329 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 SLC6A14Q9UN76 642 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 CEP83Q9Y592 693 aa10.4□□□□□ -0.74
HDLBP-228ENST00000459788 NUMA1Q14980 2115 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 BECN2A8MW95 431 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 CAPN9O14815 690 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 PAPSS1O43252 624 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 HSF2BPO75031 334 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 NDUFS2O75306 463 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 APOEP02649 317 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 DLDP09622 509 aaKnown RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 PABPC1P11940 636 aaKnown RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 CD6P30203 668 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 HLA-FP30511 346 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 IL12RB1P42701 662 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 VASPP50552 380 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 ZNF33AQ06730 810 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 PDCLQ13371 301 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 FUT11Q495W5 492 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 VWA3BQ502W6 1294 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 DENND1BQ6P3S1 775 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 SERPINA13PQ6UXR4 307 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 RBM43Q6ZSC3 357 aaKnown RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 TMEFF1Q8IYR6 380 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 FAM71AQ8IYT1 594 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 ATP6V0D2Q8N8Y2 350 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 C1orf131Q8NDD1 294 aaKnown RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 ZNF397Q8NF99 534 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 DNASE2BQ8WZ79 361 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 PIGKQ92643 395 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 PRCCQ92733 491 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 BHMTQ93088 406 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 FAM149B1Q96BN6 582 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 SLC2A13Q96QE2 648 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 TUBGCP2Q9BSJ2 902 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 CRACR2AQ9BSW2 395 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 ZDHHC5Q9C0B5 715 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 SIX2Q9NPC8 291 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 ZDHHC4Q9NPG8 344 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 WSB2Q9NYS7 404 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-228ENST00000459788 GGA2Q9UJY4 613 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 INVSQ9Y283 1065 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 CACNA1BQ00975 2339 aa10.39□□□□□ -0.75
HDLBP-228ENST00000459788 TP53BP1Q12888 1972 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 MAP1BP46821 2468 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 E5RJQ4 531 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 MSI1O43347 362 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 MOCS3O95396 460 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 TRUB2O95900 331 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 SRPRAP08240 638 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 SYPP08247 313 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CEACAM1P13688 526 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 GNSP15586 552 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 POLR2EP19388 210 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms