RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PMM2O15305 246 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 CALCAP01258 141 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 SERPINF2P08697 491 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 FTH1P19P0C7X4 201 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 BMP6P22004 513 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 IL12RB1P42701 662 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 ZNF33AQ06730 810 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 TRIP4Q15650 581 aaPredicted RBP16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 ZNF423Q2M1K9 1284 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 PEAR1Q5VY43 1037 aaPredicted RBP16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 CACUL1Q86Y37 369 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 ARHGEF19Q8IW93 802 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 RGL4Q8IZJ4 473 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 LRIG1Q96JA1 1093 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 MRGPRX1Q96LB2 322 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 BBC3Q96PG8 261 aaPredicted RBP16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 SRRTQ9BXP5 876 aaKnown RBP16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 MIS12Q9H081 205 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 CCDC86Q9H6F5 360 aaKnown RBP16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 CAPN10Q9HC96 672 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
CHCHD3-204ENST00000457942 UPK3BL1B0FP48 263 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 UPK3BL2E5RIL1 263 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 ARHGAP33O14559 1287 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 FGFR1OPO95684 399 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 CAPNS1P04632 268 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 HOXD12P35452 270 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 ZNF445P59923 1031 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 GCNT1Q02742 428 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 EIF4HQ15056 248 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 TRIP6Q15654 476 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 CNGA2Q16280 664 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 FUT11Q495W5 492 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 PKDCCQ504Y2 493 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 PMF1Q6P1K2 205 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 SERPINA13PQ6UXR4 307 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 RABEPKQ7Z6M1 372 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 SLC41A1Q8IVJ1 513 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 NAXDQ8IW45 347 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 TRIML1Q8N9V2 468 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 EHBP1Q8NDI1 1231 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 CEP76Q8TAP6 659 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 IRGQQ8WZA9 623 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 SLC2A11Q9BYW1 496 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 INTS2Q9H0H0 1204 aaKnown RBP16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 PRDM16Q9HAZ2 1276 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 THAP10Q9P2Z0 257 aaPredicted RBP16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 CLEC4EQ9ULY5 219 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 PCDHB9Q9Y5E1 797 aa16.41■□□□□ 0.22
CHCHD3-204ENST00000457942 MEI4A8MW99 385 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 FBXO21O94952 628 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 LTFP02788 710 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 EPHX1P07099 455 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 ACADMP11310 421 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 HOXD9P28356 352 aaPredicted RBP16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 ZNF234Q14588 700 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 PLEKHG6Q3KR16 790 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 FNDC3BQ53EP0 1204 aaKnown RBP16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 MARCH9Q86YJ5 346 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 TRIM59Q8IWR1 403 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 FAM217AQ8IXS0 508 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 CLEC4CQ8WTT0 213 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 SLC35F5Q8WV83 523 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 SORCS1Q8WY21 1168 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 TMA16Q96EY4 203 aaKnown RBP16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 PIWIL1Q96J94 861 aaKnown RBP16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 CD248Q9HCU0 757 aa16.4■□□□□ 0.22
CHCHD3-204ENST00000457942 TYW5A2RUC4 315 aaKnown RBP16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 EIF4E1BA6NMX2 242 aaKnown RBP16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 LATS1O95835 1130 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 NCAM1P13591 858 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 PRKCHP24723 683 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 CD6P30203 668 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 SLC11A2P49281 568 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 TBX4P57082 545 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 CAMK4Q16566 473 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 SYCP2LQ5T4T6 812 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 ADGRF1Q5T601 910 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 NUGGCQ68CJ6 796 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 MSANTD2Q6P1R3 559 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 CHST9Q7L1S5 443 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 UNC45BQ8IWX7 931 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 SCML4Q8N228 414 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 LMO3Q8TAP4 145 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 WFIKKN2Q8TEU8 576 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 PRCCQ92733 491 aaPredicted RBP16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 FAM149B1Q96BN6 582 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 SIPA1Q96FS4 1042 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 CRELD1Q96HD1 420 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 HSFY1Q96LI6 401 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 ZSWIM1Q9BR11 485 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 CKAP5Q14008 2032 aa16.39■□□□□ 0.21
CHCHD3-204ENST00000457942 FAM221BA6H8Z2 402 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 MAOBP27338 520 aa16.38■□□□□ 0.21
CHCHD3-204ENST00000457942 USP8P40818 1118 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms