RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 TM7SF2O76062 418 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 ALOX15P16050 662 aaPredicted RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 MAN1A1P33908 653 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 GDF10P55107 478 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 PTPN11Q06124 597 aaPredicted RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 SULT2A1Q06520 285 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 TRIM32Q13049 653 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 MAP2K5Q13163 448 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 CRHR2Q13324 411 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 KCTD21Q4G0X4 260 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 GRAMD4Q6IC98 578 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 HOMEZQ8IX15 550 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 EFCAB3Q8N7B9 438 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 FAM111AQ96PZ2 611 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 KATNBL1Q9H079 304 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 SENP1Q9P0U3 644 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 PSMC3IPQ9P2W1 217 aaPredicted RBP14□□□□□ -0.17
TOP3B-213ENST00000457179 ADAMTS6Q9UKP5 1117 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 PCDHGB4Q9UN71 923 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 PCDHGB5Q9Y5G0 923 aa14□□□□□ -0.17
TOP3B-213ENST00000457179 E5RJQ4 531 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 B4GALT4O60513 344 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 MAGEC1O60732 1142 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 ACAT1P24752 427 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SERPINB8P50452 374 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 AFF1P51825 1210 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 MFSD10Q14728 455 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 C15orf59Q2T9L4 293 aaPredicted RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 IYDQ6PHW0 289 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 METTL25Q8N6Q8 603 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 ZFP28Q8NHY6 868 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 FAM172AQ8WUF8 416 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SLC35B4Q969S0 331 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 PRICKLE1Q96MT3 831 aaPredicted RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SHCBP1LQ9BZQ2 653 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 CCDC195A0A1B0GUA6 201 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 F5H423 210 aaPredicted RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 CST8O60676 142 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 DLDP09622 509 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 GJA8P48165 433 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 GEMIN4P57678 1058 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 NDRG1Q92597 394 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SLCO2A1Q92959 643 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 MRPL45Q9BRJ2 306 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 CYP4F11Q9HBI6 524 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 GPATCH2LQ9NWQ4 482 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 TSPAN16Q9UKR8 245 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 CAPN8A6NHC0 703 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 TRPA1O75762 1119 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 TFAP2AP05549 437 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SMIM18P0DKX4 95 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 PROZP22891 400 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 KLRC2P26717 231 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 IL1R2P27930 398 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 RPL5P46777 297 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 EMP3P54852 163 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SLC25A3Q00325 362 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 PDE1BQ01064 536 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 FOLH1Q04609 750 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 PPIDQ08752 370 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 RNF111Q6ZNA4 994 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 ACTL9Q8TC94 416 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 HASPINQ8TF76 798 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 LPPQ93052 612 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 TMEM176AQ96HP8 235 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 RILPQ96NA2 401 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 SLX1AQ9BQ83 275 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 MRPL1Q9BYD6 325 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 DPEP3Q9H4B8 488 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 LIN28AQ9H9Z2 209 aaKnown RBP13.99□□□□□ -0.17
TOP3B-213ENST00000457179 S100A14Q9HCY8 104 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 WDR37Q9Y2I8 494 aa13.99□□□□□ -0.17
TOP3B-213ENST00000457179 RANBP2P49792 3224 aaKnown RBP13.98□□□□□ -0.17
TOP3B-213ENST00000457179 MICAL2O94851 1124 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ELNP15502 786 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 PMLP29590 882 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 SSTR1P30872 391 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 HOXA11P31270 313 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-213ENST00000457179 OTUD4Q01804 1114 aaKnown RBP13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ITGA9Q13797 1035 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 SURF1Q15526 300 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 MYLK3Q32MK0 819 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ANKRD20A4Q4UJ75 823 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 PPP6R3Q5H9R7 873 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-213ENST00000457179 RABGAP1LQ5R372 815 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ANKRD22Q5VYY1 191 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 RCOR2Q8IZ40 523 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ZCCHC9Q8N567 271 aaKnown RBP13.98□□□□□ -0.17
TOP3B-213ENST00000457179 SLC4A11Q8NBS3 891 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ICA1LQ8NDH6 482 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 CNBD2Q96M20 576 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 LZTS1Q9Y250 596 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 ERBB2P04626 1255 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 CALB1P05937 261 aa13.98□□□□□ -0.17
TOP3B-213ENST00000457179 CCDC92Q53HC0 331 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms