RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 KPNA7A9QM74 516 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 CLDN5O00501 218 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 PTGESO14684 152 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 RNF8O76064 485 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 C1QAP02745 245 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 LCP1P13796 627 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 PTPN7P35236 360 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 VHLP40337 213 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 IRX1P78414 480 aaPredicted RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 C11orf91Q3C1V1 193 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 CCDC14Q49A88 953 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 GDF6Q6KF10 455 aaPredicted RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 OLFML1Q6UWY5 402 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 MOCOSQ96EN8 888 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 THTPAQ9BU02 230 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 IQCGQ9H095 443 aaKnown RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 TIMM13Q9Y5L4 95 aaPredicted RBP12.82□□□□□ -0.36
LINC00959-201ENST00000456581 MAD1L1Q9Y6D9 718 aa12.82□□□□□ -0.36
LINC00959-201ENST00000456581 HMX2A2RU54 273 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 FAM155AB1AL88 458 aaPredicted RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 APOC4-APOC2K7ER74 178 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 PIRO00625 290 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 STK10O94804 968 aaKnown RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 BAG2O95816 211 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 APOC2P02655 101 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 KRT7P08729 469 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 SPATA31D3P0C874 917 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 ACADSP16219 412 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 GPD1P21695 349 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 ZNF143P52747 638 aaPredicted RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 KCNJ11Q14654 390 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 RNF111Q6ZNA4 994 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 SPATA31D4Q6ZUB0 917 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 HIPK4Q8NE63 616 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 SLC2A14Q8TDB8 520 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 FNIP1Q8TF40 1166 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 SLC35F5Q8WV83 523 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 TRPM7Q96QT4 1865 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 WDR35Q9P2L0 1181 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 ZC3H7BQ9UGR2 993 aaKnown RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 UBQLN1Q9UMX0 589 aaKnown RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 MFHAS1Q9Y4C4 1052 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 IQANK1A0A1B0GTG1 560 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 STAU1O95793 577 aaKnown RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 GNL1P36915 607 aaPredicted RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 PPP6R3Q5H9R7 873 aaPredicted RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 POLNQ7Z5Q5 900 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 CAND1Q86VP6 1230 aaKnown RBP12.81□□□□□ -0.36
LINC00959-201ENST00000456581 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 SH3TC2Q8TF17 1288 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 STMN2Q93045 179 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 PANX3Q96QZ0 392 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 CEP41Q9BYV8 373 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 STOML1Q9UBI4 398 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 CDY2AQ9Y6F7 541 aa12.81□□□□□ -0.36
LINC00959-201ENST00000456581 THSD7BQ9C0I4 1608 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 KIF3CO14782 793 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 SLC10A3P09131 477 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 FLT3LGP49771 235 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 CRYBB1P53674 252 aaPredicted RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 CACNA2D1P54289 1103 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 SLC34A1Q06495 639 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 TUBGCP5Q96RT8 1024 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 PAAF1Q9BRP4 392 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 SSU72Q9NP77 194 aaKnown RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ASB3Q9Y575 518 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ZNF236Q9UL36 1845 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RFPL1O75677 317 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ZMPSTE24O75844 475 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 BEST1O76090 585 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 IGHA2P01877 340 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 AKR1A1P14550 325 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 MLH1P40692 756 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 PAPOLAP51003 745 aaKnown RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 LILRA4P59901 499 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 SLC18A2Q05940 514 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RIPOR1Q6ZS17 1223 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 CTU1Q7Z7A3 348 aaKnown RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 CMASQ8NFW8 434 aaPredicted RBP12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RNF217Q8TC41 542 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 FAM172AQ8WUF8 416 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 IFT43Q96FT9 208 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 RILPQ96NA2 401 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 GAD1Q99259 594 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 CNPY3Q9BT09 278 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 USP29Q9HBJ7 922 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 POPDC2Q9HBU9 364 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 MIOSQ9NXC5 875 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 ST3GAL5Q9UNP4 418 aa12.8□□□□□ -0.36
LINC00959-201ENST00000456581 MTO1Q9Y2Z2 717 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms