RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 BTN2A3PQ96KV6 586 aa18.76■□□□□ 0.59
PDLIM2-215ENST00000456545 NAP1L5Q96NT1 182 aaPredicted RBP18.76■□□□□ 0.59
PDLIM2-215ENST00000456545 CIPCQ9C0C6 399 aa18.76■□□□□ 0.59
PDLIM2-215ENST00000456545 GMEB2Q9UKD1 530 aa18.76■□□□□ 0.59
PDLIM2-215ENST00000456545 TIMM44O43615 452 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 HOXB2P14652 356 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 HOXD9P28356 352 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 SLC6A4P31645 630 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 MATKP42679 507 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 NSFP46459 744 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 SULT1E1P49888 294 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 PITX1P78337 314 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 FMO1Q01740 532 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 GEN1Q17RS7 908 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 USP39Q53GS9 565 aaKnown RBP18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 C2CD6Q53TS8 623 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 TMEM92Q6UXU6 159 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 CHSY1Q86X52 802 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 XYLT1Q86Y38 959 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 LGI2Q8N0V4 545 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 SLC30A5Q8TAD4 765 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 GAB3Q8WWW8 586 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 EBF1Q9UH73 591 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 CLEC4EQ9ULY5 219 aa18.75■□□□□ 0.59
PDLIM2-215ENST00000456545 A0A1B0GTH6 734 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 TCRBV21S2A2A0A5A6 115 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 KCNU1A8MYU2 1149 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 F5H5T6 163 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 CYP1A1P04798 512 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 CHRNB2P17787 502 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 TNFAIP3P21580 790 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 SCNN1AP37088 669 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 UBASH3AP57075 661 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 FANCCQ00597 558 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 MTA1Q13330 715 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 FAM133BQ5BKY9 247 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 MPP7Q5T2T1 576 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 RAP1GAP2Q684P5 730 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 NADSYN1Q6IA69 706 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 MMS22LQ6ZRQ5 1243 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 MFN1Q8IWA4 741 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 CARNMT1Q8N4J0 409 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 HMGB4Q8WW32 186 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 P2RY11Q96G91 374 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 AGPAT1Q99943 283 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 TPSD1Q9BZJ3 242 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 NUCKS1Q9H1E3 243 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 ELOVL2Q9NXB9 296 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 PLA2G4CQ9UP65 541 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 PAXBP1Q9Y5B6 917 aa18.74■□□□□ 0.59
PDLIM2-215ENST00000456545 A0A1W2PQC6 194 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 H0Y626 953 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 NPC1O15118 1278 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 ADAM23O75077 832 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 F9P00740 461 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 IGLV3-25P01717 112 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 HNRNPLP14866 589 aaKnown RBP eCLIP18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 TACR2P21452 398 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 SGSHP51688 502 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 DEUP1Q05D60 604 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 NR1I3Q14994 352 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 EIF4HQ15056 248 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 MS4A13Q5J8X5 152 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 LAIR1Q6GTX8 287 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 CHST9Q7L1S5 443 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 PHLDB2Q86SQ0 1253 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 CFAP52Q8N1V2 620 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 WFIKKN2Q8TEU8 576 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 ACOX2Q99424 681 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 C11orf70Q9BRQ4 267 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 WDCPQ9H6R7 721 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 ABCB8Q9NUT2 735 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 TMEM51Q9NW97 253 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 CACNA2D2Q9NY47 1150 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 ADAM22Q9P0K1 906 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 XPO7Q9UIA9 1087 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 MYO6Q9UM54 1294 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 INVSQ9Y283 1065 aa18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 MYO18AQ92614 2054 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-215ENST00000456545 GFRA2O00451 464 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 PABPC1P11940 636 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 POLR2EP19388 210 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 CDH18Q13634 790 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 BYSLQ13895 437 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 STARD3Q14849 445 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 ASIC2Q16515 512 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 RABGAP1LQ5R372 815 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 SFMBT2Q5VUG0 894 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 AHI1Q8N157 1196 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 ERLEC1Q96DZ1 483 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 NPY6RQ99463 290 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 NUP58Q9BVL2 599 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 SIK2Q9H0K1 926 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 GGA2Q9UJY4 613 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 STON1Q9Y6Q2 735 aa18.72■□□□□ 0.59
PDLIM2-215ENST00000456545 MAP3K13O43283 966 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 SYNCRIPO60506 623 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 MOCS3O95396 460 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms