RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 CORO1AP31146 461 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 MARCKSL1P49006 195 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SLC11A2P49281 568 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 AMPD2Q01433 879 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 FCHO2Q0JRZ9 810 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 PPP2R5EQ16537 467 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 CA9Q16790 459 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 FAM133BQ5BKY9 247 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 MS4A13Q5J8X5 152 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 KCNT1Q5JUK3 1230 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 ADGRF1Q5T601 910 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 PIK3R6Q5UE93 754 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 RNF43Q68DV7 783 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 EP400NLQ6ZTU2 488 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 MAP7D3Q8IWC1 876 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SH3RF2Q8TEC5 729 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 RNF34Q969K3 372 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 WBP2Q969T9 261 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 RBM41Q96IZ5 413 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 C16orf45Q96MC5 204 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 DDX50Q9BQ39 737 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF670Q9BS34 389 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SLITRK6Q9H5Y7 841 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SMPD4Q9NXE4 827 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 COX16Q9P0S2 106 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 CFAP97Q9P2B7 532 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 TBC1D14Q9P2M4 693 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 PPARGC1AQ9UBK2 798 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 AGO1Q9UL18 857 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 TTC7AQ9ULT0 858 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SNX12Q9UMY4 172 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 CCL26Q9Y258 94 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SH3BP1Q9Y3L3 701 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 HS3ST4Q9Y661 456 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 DRGXA6NNA5 263 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 ANHXE9PGG2 379 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 SLC9A3R1O14745 358 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 TCP1P17987 556 aaKnown RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 IL4RP24394 825 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 SSR1P43307 286 aaKnown RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 DPYSL3Q14195 570 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 SMTNL2Q2TAL5 461 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 ATP13A4Q4VNC1 1196 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 DCAF12L1Q5VU92 463 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 NADSYN1Q6IA69 706 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 SYT10Q6XYQ8 523 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 MTSS1LQ765P7 747 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 DENND1CQ8IV53 801 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 ZDHHC14Q8IZN3 488 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 MAFAQ8NHW3 353 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 RIN3Q8TB24 985 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 RAPGEF5Q92565 580 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 NXPE3Q969Y0 559 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 ELSPBP1Q96BH3 223 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 ACSF2Q96CM8 615 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 RSPRY1Q96DX4 576 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 PBKQ96KB5 322 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 LRRC3BQ96PB8 259 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 EPAS1Q99814 870 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 PHF7Q9BWX1 381 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 ZWILCHQ9H900 591 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 PCDH18Q9HCL0 1135 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 OR12D3Q9UGF7 316 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 DNAI1Q9UI46 699 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 XPO7Q9UIA9 1087 aaKnown RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 PACSIN2Q9UNF0 486 aaPredicted RBP11.64□□□□□ -0.55
TRAF4-206ENST00000454852 NEU3Q9UQ49 428 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 FAM50BQ9Y247 325 aa11.64□□□□□ -0.55
TRAF4-206ENST00000454852 WASH4PA8MWX3 477 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 ENC1O14682 589 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 LRIG2O94898 1065 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 KRT1P04264 644 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 HMBSP08397 361 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 PYGMP11217 842 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 TNNT1P13805 278 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 TACR2P21452 398 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 CASQ1P31415 396 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 CHKAP35790 457 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 CDKN2BP42772 138 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 CDH6P55285 790 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 AUHQ13825 339 aaKnown RBP11.63□□□□□ -0.55
TRAF4-206ENST00000454852 CLUL1Q15846 466 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 MPP7Q5T2T1 576 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 TTC39BQ5VTQ0 682 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-206ENST00000454852 MFSD6LQ8IWD5 586 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 RASGEF1CQ8N431 466 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 KCTD6Q8NC69 237 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 BPIFB1Q8TDL5 484 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 DEPDC1BQ8WUY9 529 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 OSCP1Q8WVF1 389 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 HSPH1Q92598 858 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 KCTD15Q96SI1 283 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-206ENST00000454852 OSBPL9Q96SU4 736 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 SMG9Q9H0W8 520 aaKnown RBP11.63□□□□□ -0.55
TRAF4-206ENST00000454852 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
TRAF4-206ENST00000454852 ZFP14Q9HCL3 533 aa11.63□□□□□ -0.55
TRAF4-206ENST00000454852 TMPRSS4Q9NRS4 437 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms