RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SLC2A13Q96QE2 648 aa14.09□□□□□ -0.15
CLK3-203ENST00000454830 LGALS13Q9UHV8 139 aa14.09□□□□□ -0.15
CLK3-203ENST00000454830 F9P00740 461 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 FAM163BP0C2L3 166 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 PSMB4P28070 264 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 RPL34P49207 117 aaKnown RBP14.08□□□□□ -0.15
CLK3-203ENST00000454830 SLC5A3P53794 718 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 CLLU1OSQ5K130 101 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 DQX1Q8TE96 717 aaKnown RBP14.08□□□□□ -0.15
CLK3-203ENST00000454830 CENPTQ96BT3 561 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 SUSD3Q96L08 255 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 UROC1Q96N76 676 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 C12orf65Q9H3J6 166 aaKnown RBP14.08□□□□□ -0.15
CLK3-203ENST00000454830 ACSS3Q9H6R3 686 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 SLC24A2Q9UI40 661 aa14.08□□□□□ -0.15
CLK3-203ENST00000454830 TCEA3O75764 348 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 CCL23P55773 120 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
CLK3-203ENST00000454830 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 MAML1Q92585 1016 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 NUP205Q92621 2012 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 A0A0A0MRY4 1105 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 C9IYK1 514 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 FAM155BO75949 473 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 XRCC4Q13426 336 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 ZNF296Q8WUU4 475 aaPredicted RBP14.08□□□□□ -0.16
CLK3-203ENST00000454830 SPATA13Q96N96 652 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 APOL2Q9BQE5 337 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 WDR83Q9BRX9 315 aaKnown RBP14.08□□□□□ -0.16
CLK3-203ENST00000454830 ANLNQ9NQW6 1124 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 UBP1Q9NZI7 540 aa14.08□□□□□ -0.16
CLK3-203ENST00000454830 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.08□□□□□ -0.16
CLK3-203ENST00000454830 IQANK1A0A1B0GTG1 560 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 SOAT2O75908 522 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 HMBSP08397 361 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 RPA3P35244 121 aaPredicted RBP14.07□□□□□ -0.16
CLK3-203ENST00000454830 ARHGEF6Q15052 776 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 TTC16Q8NEE8 873 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 SEPT5Q99719 369 aaPredicted RBP14.07□□□□□ -0.16
CLK3-203ENST00000454830 RGS18Q9NS28 235 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 FBXW11Q9UKB1 542 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 CCDC78A2IDD5 438 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 FKTNO75072 461 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 GCAP28676 217 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 GPR15P49685 360 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 FAAP100Q0VG06 881 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 PRPF39Q86UA1 669 aaKnown RBP14.07□□□□□ -0.16
CLK3-203ENST00000454830 DCP1BQ8IZD4 617 aaKnown RBP14.07□□□□□ -0.16
CLK3-203ENST00000454830 MPP5Q8N3R9 675 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 SCLYQ96I15 445 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 DEFB118Q96PH6 123 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 HCSTQ9UBK5 93 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 SLC27A5Q9Y2P5 690 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 ARVCFO00192 962 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 AMHP03971 560 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 DNAJC3Q13217 504 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 BMPR2Q13873 1038 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 MGAT5BQ3V5L5 792 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 CES3Q6UWW8 571 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 LRRC8CQ8TDW0 803 aa14.07□□□□□ -0.16
CLK3-203ENST00000454830 LRIG2O94898 1065 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 SELPP16109 830 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 LVRNQ6Q4G3 990 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 ZNF598Q86UK7 904 aaKnown RBP14.06□□□□□ -0.16
CLK3-203ENST00000454830 WDR6Q9NNW5 1121 aaKnown RBP14.06□□□□□ -0.16
CLK3-203ENST00000454830 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.06□□□□□ -0.16
CLK3-203ENST00000454830 WDR27A2RRH5 827 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 GCATO75600 419 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 EOMESO95936 686 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 OLIG2Q13516 323 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 CAND1Q86VP6 1230 aaKnown RBP14.06□□□□□ -0.16
CLK3-203ENST00000454830 LRRC6Q86X45 466 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 MIB1Q86YT6 1006 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 PITPNM3Q9BZ71 974 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 SLC13A1Q9BZW2 595 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 RCOR3Q9P2K3 495 aaPredicted RBP14.06□□□□□ -0.16
CLK3-203ENST00000454830 TEX264Q9Y6I9 313 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 TRIM49D1C9J1S8 452 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 M0QZQ0 153 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 JCHAINP01591 159 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 MGAT1P26572 445 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 BFSP2Q13515 415 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 TNFAIP8L3Q5GJ75 292 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 SPOUT1Q5T280 376 aaKnown RBP14.06□□□□□ -0.16
CLK3-203ENST00000454830 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 FAM171BQ6P995 826 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 STAMBPL1Q96FJ0 436 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 SENP1Q9P0U3 644 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 TXNDC16Q9P2K2 825 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 KANSL3Q9P2N6 904 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
CLK3-203ENST00000454830 A0A1W2PQH9 124 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 C5orf60A6NFR6 353 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 HACD1B0YJ81 288 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 HHLA1C9JL84 531 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 E7ESA3 106 aa14.05□□□□□ -0.16
CLK3-203ENST00000454830 SERPINB6P35237 376 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms