RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 DNAJB4Q9UDY4 337 aa9.13□□□□□ -0.95
RPE-216ENST00000454822 FAM47DPA6NHR8 397 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 RNF103O00237 685 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 ENPP3O14638 875 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 TNFRSF10BO14763 440 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 PPP1R12AO14974 1030 aaPredicted RBP9.12□□□□□ -0.95
RPE-216ENST00000454822 PRPF4O43172 522 aaKnown RBP eCLIP9.12□□□□□ -0.95
RPE-216ENST00000454822 NBNO60934 754 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 FKTNO75072 461 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 OAZ2O95190 189 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 FDFT1P37268 417 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 MAGEA3P43357 314 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 CDK7P50613 346 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 GPNMBQ14956 572 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 SLC39A12Q504Y0 691 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 C6orf89Q6UWU4 347 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 PDZD4Q76G19 769 aaPredicted RBP9.12□□□□□ -0.95
RPE-216ENST00000454822 ZNF534Q76KX8 674 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 CACNA2D3Q8IZS8 1091 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 C4orf33Q8N1A6 199 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 COLGALT1Q8NBJ5 622 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 GDAP1Q8TB36 358 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 DQX1Q8TE96 717 aaKnown RBP9.12□□□□□ -0.95
RPE-216ENST00000454822 DENND1AQ8TEH3 1009 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 RNF34Q969K3 372 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 LRRC39Q96DD0 335 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 SIGLEC10Q96LC7 697 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 SMC6Q96SB8 1091 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 ZCWPW1Q9H0M4 648 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 TMEM161AQ9NX61 479 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 ZC3H7BQ9UGR2 993 aaKnown RBP9.12□□□□□ -0.95
RPE-216ENST00000454822 PRG3Q9Y2Y8 225 aaPredicted RBP9.12□□□□□ -0.95
RPE-216ENST00000454822 PTPRDP23468 1912 aa9.12□□□□□ -0.95
RPE-216ENST00000454822 NLRC5Q86WI3 1866 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 TCP11X1B4DZS4 312 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 OPHN1O60890 802 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 TADA2AO75478 443 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 STK10O94804 968 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 COL6A1P12109 1028 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 STX2P32856 288 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 GRIA1P42261 906 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 PGFP49763 221 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 VEGFBP49765 207 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 APLP1P51693 650 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 SLC5A3P53794 718 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 SLC18A1P54219 525 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 WDR4P57081 412 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 CORO7P57737 925 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 IFRD2Q12894 506 aaPredicted RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 IFT88Q13099 833 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 ARHGEF6Q15052 776 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 KBTBD12Q3ZCT8 623 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 PIGWQ7Z7B1 504 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 PRPF39Q86UA1 669 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 SCN4BQ8IWT1 228 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 DCP1BQ8IZD4 617 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 DBF4BQ8NFT6 615 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 MZB1Q8WU39 189 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 ZNF296Q8WUU4 475 aaPredicted RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 SGSM3Q96HU1 749 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 FERMT1Q9BQL6 677 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 TRIM62Q9BVG3 475 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 PLAC1Q9HBJ0 212 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 SEPT10Q9P0V9 454 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 OR12D3Q9UGF7 316 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 SMG5Q9UPR3 1016 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 TTLL3Q9Y4R7 772 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 RAD54BQ9Y620 910 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 MYO18AQ92614 2054 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 F5H423 210 aaPredicted RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 TRDMT1O14717 391 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 LRIG2O94898 1065 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 ASMTLO95671 621 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 IGLV3-25P01717 112 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 C1QAP02745 245 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 KRT4P19013 534 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 ZNF135P52742 658 aaPredicted RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 SARNPP82979 210 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 CDK16Q00536 496 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 BFSP2Q13515 415 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 EIF4EBP2Q13542 120 aaPredicted RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 PARP6Q2NL67 630 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 BTBD8Q5XKL5 378 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 SCD5Q86SK9 330 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 ZNF567Q8N184 647 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 MPP5Q8N3R9 675 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 SLC44A1Q8WWI5 657 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 CABS1Q96KC9 395 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 MAGEB18Q96M61 343 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 EPAS1Q99814 870 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 EBNA1BP2Q99848 306 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 ELAC2Q9BQ52 826 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 CEP41Q9BYV8 373 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.11□□□□□ -0.95
RPE-216ENST00000454822 OSBPL2Q9H1P3 480 aa9.11□□□□□ -0.95
RPE-216ENST00000454822 ELAC1Q9H777 363 aaKnown RBP9.11□□□□□ -0.95
RPE-216ENST00000454822 XAB2Q9HCS7 855 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms