RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ZNF268Q14587 947 aaPredicted RBP11.5□□□□□ -0.57
DDR1-240ENST00000454612 DLG2Q15700 870 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 RIOX2Q8IUF8 465 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 TEX9Q8N6V9 391 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 CCDC185Q8N715 623 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 PLD5Q8N7P1 536 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 PLEKHA5Q9HAU0 1116 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 STAP1Q9ULZ2 295 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 LZTS1Q9Y250 596 aa11.5□□□□□ -0.57
DDR1-240ENST00000454612 CCL22O00626 93 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 NVLO15381 856 aaKnown RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 DCXO43602 365 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 TPST1O60507 370 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 EDF1O60869 148 aaKnown RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 SNAPC2Q13487 334 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ART3Q13508 389 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 CYP1B1Q16678 543 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 FBXO48Q5FWF7 155 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 PPP1R2P3Q6NXS1 205 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 FASTKD5Q7L8L6 764 aaKnown RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ST13P4Q8IZP2 240 aaPredicted RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 FAM13CQ8NE31 585 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 RNF139Q8WU17 664 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 PEBP4Q96S96 227 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 MMADHCQ9H3L0 296 aaPredicted RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 RBPJLQ9UBG7 517 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 SIX4Q9UIU6 781 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 RABGEF1Q9UJ41 708 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ATAD5Q96QE3 1844 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 AHCYL1O43865 530 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 TGFB3P10600 412 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 GRIK1P39086 918 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 SH3BGRP55822 239 aaPredicted RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 TRIP10Q15642 601 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 AGGF1Q8N302 714 aaeCLIP11.49□□□□□ -0.575e-7■■■■■ 43.7
DDR1-240ENST00000454612 RHOBTB2Q9BYZ6 727 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ANLNQ9NQW6 1124 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 FAM200BP0CF97 657 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 SLC6A3Q01959 620 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 NSUN2Q08J23 767 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDR1-240ENST00000454612 PDK4Q16654 411 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 DGKDQ16760 1214 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 LRRC43Q8N309 656 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 MAB21L3Q8N8X9 362 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 PCDH19Q8TAB3 1148 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ULBP1Q9BZM6 244 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 PCDH18Q9HCL0 1135 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 NMRK2Q9NPI5 230 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 PNPOQ9NVS9 261 aa11.49□□□□□ -0.57
DDR1-240ENST00000454612 ABI2Q9NYB9 513 aaPredicted RBP11.49□□□□□ -0.57
DDR1-240ENST00000454612 MAGEB2O15479 319 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 XPOTO43592 962 aaKnown RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 SLC25A27O95847 323 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 ZNF143P52747 638 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 ANO4Q32M45 955 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 SNX30Q5VWJ9 437 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PDZD4Q76G19 769 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 APBA2Q99767 749 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 WWP1Q9H0M0 922 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 CLUHO75153 1309 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 UBA6A0AVT1 1052 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 KPNA7A9QM74 516 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 TPP1O14773 563 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PGK1P00558 417 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PIRTP0C851 137 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 FAM117BQ6P1L5 589 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 NOTUMQ6P988 496 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 LCA5Q86VQ0 697 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PHF21BQ96EK2 531 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 OXNAD1Q96HP4 312 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 EBF4Q9BQW3 602 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 DENND2DQ9H6A0 471 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 NRDE2Q9H7Z3 1164 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 DDX43Q9NXZ2 648 aaKnown RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PRR5-ARHGAP8B1AHC4 643 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 CELF2O95319 508 aaKnown RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 ASMTLO95671 621 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PROCP04070 461 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 ITGAVP06756 1048 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 GHRP10912 638 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 BDNFP23560 247 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 KLRC2P26717 231 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 TAF6P49848 677 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 ARHGAP8P85298 464 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 OCRLQ01968 901 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 TAF1CQ15572 869 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 LACTB2Q53H82 288 aaPredicted RBP11.48□□□□□ -0.57
DDR1-240ENST00000454612 MFSD5Q6N075 450 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 HTR3CQ8WXA8 447 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 TNIP3Q96KP6 325 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 B3GALT6Q96L58 329 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 PIF1Q9H611 641 aa11.48□□□□□ -0.57
DDR1-240ENST00000454612 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms