RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 PLD5Q8N7P1 536 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 COLGALT1Q8NBJ5 622 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 CLEC4DQ8WXI8 215 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 AZIN2Q96A70 460 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 PGLYRP2Q96PD5 576 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 UBP1Q9NZI7 540 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 BFARQ9NZS9 450 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 DOLKQ9UPQ8 538 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 DLEC1Q9Y238 1755 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 SLC15A5A6NIM6 579 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 ASLP04424 464 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 ITGAXP20702 1163 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 ZNF781Q8N8C0 355 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 C12orf29Q8N999 325 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 KLHL23Q8NBE8 558 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 CATSPER1Q8NEC5 780 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 ITFG2Q969R8 447 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 ERLEC1Q96DZ1 483 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 EFHD1Q9BUP0 239 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 FETUBQ9UGM5 382 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 PSMD13Q9UNM6 376 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 FZD1Q9UP38 647 aa14.24□□□□□ -0.13
UBE2D3-210ENST00000453744 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PDGFRBP09619 1106 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 TPH1P17752 444 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SLC25A11Q02978 314 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PTK2BQ14289 1009 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 USP10Q14694 798 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 TLR1Q15399 786 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 STXBP2Q15833 593 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SUPT20HL1Q3ZLR7 823 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ITPRIPL1Q6GPH6 555 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 NIPA1Q7RTP0 329 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 TMC7Q7Z402 723 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ACOT1Q86TX2 421 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 NCAPG2Q86XI2 1143 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 TRAPPC12Q8WVT3 735 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 LGMNQ99538 433 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 GCOM2Q9BZD3 368 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PAIP1Q9H074 479 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ARHGEF4Q9NR80 690 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SNX9Q9Y5X1 595 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 GJA3Q9Y6H8 435 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 MAGEB3O15480 346 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 CRTAMO95727 393 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 POLBP06746 335 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ABCD1P33897 745 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ETFBP38117 255 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 NME5P56597 212 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 RPS6KA2Q15349 733 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 GOLGA7BQ2TAP0 167 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ARCQ7LC44 396 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 WDTC1Q8N5D0 677 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PDZD8Q8NEN9 1154 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 RNF34Q969K3 372 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 HSPBAP1Q96EW2 488 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 WRNIP1Q96S55 665 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SNRNP25Q9BV90 132 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 POPDC2Q9HBU9 364 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PAIP2BQ9ULR5 123 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 MRPL42Q9Y6G3 142 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 V9GYQ6 96 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 A0A096LPK6 155 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ANKRD33BA6NCL7 494 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SAC3D1A6NKF1 404 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PHGDHO43175 533 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 DHRS4L1P0CG22 281 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 GABRB2P47870 512 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 AP3M2P53677 418 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 NAGLUP54802 743 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 PDAP1Q13442 181 aaKnown RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 DLG2Q15700 870 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 FAM160B1Q5W0V3 765 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 TMEM198Q66K66 360 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SEL1L3Q68CR1 1132 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 GRAMD4Q6IC98 578 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 ZNF354CQ86Y25 554 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 SNX31Q8N9S9 440 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 FAM210AQ96ND0 272 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 FRMD8Q9BZ67 464 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 TSPAN16Q9UKR8 245 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 AKT3Q9Y243 479 aa14.23□□□□□ -0.13
UBE2D3-210ENST00000453744 DOT1LQ8TEK3 1739 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 CAPN14A8MX76 684 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 RGL2O15211 777 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 PLIN3O60664 434 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 PABPC4LP0CB38 370 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 XRCC1P18887 633 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 ME2P23368 584 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 SPRP35270 261 aaPredicted RBP14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 TEDDM1Q5T9Z0 273 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 PACS1Q6VY07 963 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 XYLT1Q86Y38 959 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 MYO1HQ8N1T3 1032 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 SPATA6LQ8N4H0 392 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 TMEM176AQ96HP8 235 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 SLC4A5Q9BY07 1137 aa14.22□□□□□ -0.13
UBE2D3-210ENST00000453744 WDR41Q9HAD4 459 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms