RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TFRCP02786 760 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 GSTM1P09488 218 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RHOXF2BP0C7M4 288 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SUPT20HL2P0C7V6 817 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 TXNP10599 105 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ALADP13716 330 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PECAM1P16284 738 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MALP21145 153 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 KLRC1P26715 233 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SDHAP31040 664 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RABIFP47224 123 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 CAMLGP49069 296 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 LIG4P49917 911 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MRPL12P52815 198 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 GABPB1Q06547 395 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PPP3CAQ08209 521 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MGAT5Q09328 741 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 LMAN2Q12907 356 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 NPRL3Q12980 569 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SP140Q13342 867 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RIPK1Q13546 671 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 LAPTM5Q13571 262 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RAB39AQ14964 217 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PDK1Q15118 436 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MAN2A1Q16706 1144 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRICKLE4Q2TBC4 344 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SUPT20HL1Q3ZLR7 823 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ADGRF1Q5T601 910 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 C12orf60Q5U649 245 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RAP1GAP2Q684P5 730 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ETFRF1Q6IPR1 90 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 KIAA1841Q6NSI8 718 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 KLHL35Q6PF15 583 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 USP17L6PQ6QN14 398 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM180AQ6UWF9 173 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SUSD1Q6UWL2 747 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 KRT28Q7Z3Y7 464 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ADGRA1Q86SQ6 560 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SP8Q8IXZ3 490 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MAML2Q8IZL2 1156 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SYT2Q8N9I0 419 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 CNNM3Q8NE01 707 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 OR56B2PQ8NGI1 322 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRPF31Q8WWY3 499 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 CFHR4Q92496 578 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RSC1A1Q92681 617 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MR1Q95460 341 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMX3Q96JJ7 454 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 CMTM3Q96MX0 182 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 DMRTA2Q96SC8 542 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SH3GL2Q99962 352 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 TCF25Q9BQ70 676 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 RHOXF2Q9BQY4 288 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 FDXACB1Q9BRP7 624 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 HTATIP2Q9BUP3 242 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 DPH1Q9BZG8 443 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC7A5P2Q9GIP4 190 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 DNAJC18Q9H819 358 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MRPL44Q9H9J2 332 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCNK12Q9HB15 430 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 IL21RQ9HBE5 538 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 LTB4R2Q9NPC1 389 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ABCB8Q9NUT2 735 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZSCAN32Q9NX65 697 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 EHD2Q9NZN4 543 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 CWC15Q9P013 229 aaKnown RBP4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM153AQ9UHL3 310 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 SCOCQ9UIL1 159 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 MID2Q9UJV3 735 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 KCNE2Q9Y6J6 123 aa4.65□□□□□ -1.67
HMGB3P21-201ENST00000452483 A0A1W2PQ45 241 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 A0A1W2PQY0 241 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 OR14I1A6ND48 311 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MBD3L4A6NDZ8 208 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MBD3L3A6NE82 208 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRAMEF25A6NGN4 478 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 GLOD5A6NK44 160 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM232C9JQI7 657 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 KIF2AO00139 706 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCDH17O14917 1159 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 STAMBPO95630 424 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CELA3BP08861 270 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 FTH1P19P0C7X4 201 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 TPBGLP0DKB5 382 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 GAAP10253 952 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 SKILP12757 684 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 MCM3P25205 808 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 KLRK1P26718 216 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 SERPINA4P29622 427 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 SOX6P35712 828 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 GNL1P36915 607 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CPA2P48052 419 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NRIP1P48552 1158 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 CENPAP49450 140 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 DIO1P49895 249 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 NPY4RP50391 375 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ETV1P50549 477 aa4.64□□□□□ -1.67
HMGB3P21-201ENST00000452483 ATXN3P54252 364 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms