RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 PLA2G4CQ9UP65 541 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 CNTNAP2Q9UHC6 1331 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 EEF2KO00418 725 aaKnown RBP11.5□□□□□ -0.57
DDR1-239ENST00000452441 DCXO43602 365 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 METTL18O95568 372 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 ABHD2P08910 425 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 CPB1P15086 417 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 STIP1P31948 543 aaKnown RBP11.5□□□□□ -0.57
DDR1-239ENST00000452441 ASPAP45381 313 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 PITX1P78337 314 aaPredicted RBP11.5□□□□□ -0.57
DDR1-239ENST00000452441 MOGSQ13724 837 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 DLG2Q15700 870 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 SNX30Q5VWJ9 437 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 CDHR3Q6ZTQ4 885 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
DDR1-239ENST00000452441 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
DDR1-239ENST00000452441 PABPC5Q96DU9 382 aaKnown RBP11.5□□□□□ -0.57
DDR1-239ENST00000452441 RNF157Q96PX1 679 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 ZNF518BQ9C0D4 1074 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 ASB7Q9H672 318 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 VTA1Q9NP79 307 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 KRT82Q9NSB4 513 aa11.5□□□□□ -0.57
DDR1-239ENST00000452441 CLUHO75153 1309 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 FGFR1P11362 822 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 SCNN1GP51170 649 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 CCDC15Q0P6D6 951 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 BRI3BPQ8WY22 251 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 EBF4Q9BQW3 602 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 CHST12Q9NRB3 414 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 BFARQ9NZS9 450 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 LRFN2Q9ULH4 789 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 V9GYQ6 96 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 GPC4O75487 556 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 C22orf31O95567 290 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 ABL2P42684 1182 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 BOLA3Q53S33 107 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 SH2D4BQ5SQS7 431 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 CCDC185Q8N715 623 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 PLD5Q8N7P1 536 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 RAB3IL1Q8TBN0 382 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 RAET1EQ8TD07 263 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 DENND1AQ8TEH3 1009 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 TFB1MQ8WVM0 346 aaKnown RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 C10orf82Q8WW14 230 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 TBCBQ99426 244 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 SUDS3Q9H7L9 328 aaPredicted RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 IARS2Q9NSE4 1012 aaKnown RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 DDX43Q9NXZ2 648 aaKnown RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDR1-239ENST00000452441 FAM8A1Q9UBU6 413 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 PGAP2Q9UHJ9 254 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 PRR5-ARHGAP8B1AHC4 643 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 TPBGLP0DKB5 382 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 T-ENOLP0DO92 83 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 TKTL1P51854 596 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 ARHGAP8P85298 464 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 USP10Q14694 798 aaKnown RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 TRIP10Q15642 601 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 FBXO48Q5FWF7 155 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 BBS12Q6ZW61 710 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 STRA8Q7Z7C7 330 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 CLNKQ7Z7G1 428 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 SLC7A6OSQ96CW6 309 aaPredicted RBP11.49□□□□□ -0.57
DDR1-239ENST00000452441 EURLQ9NYK6 297 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 SIX4Q9UIU6 781 aa11.49□□□□□ -0.57
DDR1-239ENST00000452441 RNF103O00237 685 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 NDC80O14777 642 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PRPF4O43172 522 aaKnown RBP eCLIP11.48□□□□□ -0.57
DDR1-239ENST00000452441 STRNO43815 780 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 TPST1O60507 370 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PROCP04070 461 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 SKIP12755 728 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ARHGAP1Q07960 439 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PARP6Q2NL67 630 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 ILDR2Q71H61 639 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PDZD4Q76G19 769 aaPredicted RBP11.48□□□□□ -0.57
DDR1-239ENST00000452441 CDKL3Q8IVW4 592 aaPredicted RBP11.48□□□□□ -0.57
DDR1-239ENST00000452441 CCDC97Q96F63 343 aaPredicted RBP11.48□□□□□ -0.57
DDR1-239ENST00000452441 OXNAD1Q96HP4 312 aaPredicted RBP11.48□□□□□ -0.57
DDR1-239ENST00000452441 FOXP3Q9BZS1 431 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 VCXQ9H320 206 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PNPOQ9NVS9 261 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 NT5C1B-RDH14C9J2C7 533 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 CCL22O00626 93 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 TPP1O14773 563 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 TSPAN1O60635 241 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 SMNDC1O75940 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
DDR1-239ENST00000452441 STBD1O95210 358 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 FAM200BP0CF97 657 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 TGM2P21980 687 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 PTP4A2Q12974 167 aa11.48□□□□□ -0.57
DDR1-239ENST00000452441 TFAP2DQ7Z6R9 452 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms