RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZBTB16Q05516 673 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 ADIGQ0VDE8 80 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 CAMK2GQ13555 558 aaPredicted RBP11.37□□□□□ -0.59
USP1-204ENST00000452143 CUL2Q13617 745 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 GOLGA7BQ2TAP0 167 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 SGO2Q562F6 1265 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 TMEM215Q68D42 235 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 PROSER1Q86XN7 944 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 AHI1Q8N157 1196 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 SIX6OS1Q8N1H7 587 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 SCML4Q8N228 414 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP1-204ENST00000452143 ZNF557Q8N988 423 aaPredicted RBP11.37□□□□□ -0.59
USP1-204ENST00000452143 OR2T3Q8NH03 318 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 RNF139Q8WU17 664 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 MIR1-1HGQ9H1L0 117 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 TMEM245Q9H330 911 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 ABCC13Q9NSE7 274 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 RMND1Q9NWS8 449 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
USP1-204ENST00000452143 PCOLCE2Q9UKZ9 415 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 CLEC4EQ9ULY5 219 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 APOBEC2Q9Y235 224 aaKnown RBP11.37□□□□□ -0.59
USP1-204ENST00000452143 COQ4Q9Y3A0 265 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 PCDHGB2Q9Y5G2 931 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 SMG1Q96Q15 3661 aaKnown RBP11.37□□□□□ -0.59
USP1-204ENST00000452143 PLXNB3Q9ULL4 1909 aa11.37□□□□□ -0.59
USP1-204ENST00000452143 FLRT2O43155 660 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 CBFA2T3O75081 653 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 ZNF202O95125 648 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 TBXAS1P24557 533 aaPredicted RBP11.36□□□□□ -0.59
USP1-204ENST00000452143 AFF3P51826 1226 aaKnown RBP11.36□□□□□ -0.59
USP1-204ENST00000452143 CBWD6Q4V339 395 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 DCAF17Q5H9S7 520 aaPredicted RBP11.36□□□□□ -0.59
USP1-204ENST00000452143 CBWD3Q5JTY5 395 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 CBWD5Q5RIA9 395 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 MPP7Q5T2T1 576 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 ADGRF1Q5T601 910 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 TCERG1LQ5VWI1 586 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 CACUL1Q86Y37 369 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 FMNL3Q8IVF7 1028 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 ZC3H3Q8IXZ2 948 aaKnown RBP11.36□□□□□ -0.59
USP1-204ENST00000452143 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 SORCS1Q8WY21 1168 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 KCTD13Q8WZ19 329 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 CAMK1GQ96NX5 476 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 LHX5Q9H2C1 402 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 GAREM1Q9H706 876 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 OSGEPQ9NPF4 335 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 CNGB3Q9NQW8 809 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 TM7SF3Q9NS93 570 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 PLA2G4CQ9UP65 541 aa11.36□□□□□ -0.59
USP1-204ENST00000452143 YJEFN3A6XGL0 299 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 E7ENQ6 273 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 TULP2O00295 520 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 O00370 1275 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 IRAK2O43187 625 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 CAPNS1P04632 268 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 VDRP11473 427 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 LRRC63Q05C16 580 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 FNDC3BQ53EP0 1204 aaKnown RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 BSPRYQ5W0U4 402 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 MSANTD2Q6P1R3 559 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 KIAA0907Q7Z7F0 614 aaPredicted RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 SMYD4Q8IYR2 804 aaPredicted RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 C1orf216Q8TAB5 229 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 BAHD1Q8TBE0 780 aaPredicted RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 IRGQQ8WZA9 623 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 GOLGA1Q92805 767 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 TATDN2Q93075 761 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 TSG101Q99816 390 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 GTPBP4Q9BZE4 634 aaKnown RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 GOLPH3LQ9H4A5 285 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 ABCB8Q9NUT2 735 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 KIAA1522Q9P206 1035 aaPredicted RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 EIF2B4Q9UI10 523 aaKnown RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 GGA2Q9UJY4 613 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 FNDC3AQ9Y2H6 1198 aaKnown RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.35□□□□□ -0.59
USP1-204ENST00000452143 ZDHHC9Q9Y397 364 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
USP1-204ENST00000452143 LOC400499M0QZD8 3231 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 IGLV3-27P01718 113 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 DNTTP04053 509 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 ATP5BP06576 529 aaKnown RBP11.34□□□□□ -0.59
USP1-204ENST00000452143 PAEPP09466 180 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
USP1-204ENST00000452143 PABPC1P11940 636 aaKnown RBP11.34□□□□□ -0.59
USP1-204ENST00000452143 HLA-EP13747 358 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 CD19P15391 556 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 GRIA4P48058 902 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 DAOAP59103 153 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 RING1Q06587 406 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 STILQ15468 1287 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 TEAD4Q15561 434 aa11.34□□□□□ -0.59
USP1-204ENST00000452143 PTPRNQ16849 979 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms