RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 TCRBV5S1A1TA0A578 114 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 TISP43B9A030 160 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 STX16-NPEPL1H3BU86 382 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 STX16O14662 325 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 RHOBTB3O94955 611 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 NHLRC4P0CG21 123 aaPredicted RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 ATF7P17544 494 aaPredicted RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 GPD1P21695 349 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 STAT6P42226 847 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 VPS41P49754 854 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 AGTR2P50052 363 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 INHBCP55103 352 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 FOXL2P58012 376 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 RBM6P78332 1123 aaKnown RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 HOXA4Q00056 320 aaPredicted RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 SLC14A1Q13336 389 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 SLC12A1Q13621 1099 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 SMAD1Q15797 465 aaKnown RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 FAM110CQ1W6H9 321 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 TMEM119Q4V9L6 283 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 ALFQ53S48 1182 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 LVRNQ6Q4G3 990 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 LRRTM4Q86VH4 590 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 TMEM57Q8N5G2 664 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 AMER2Q8N7J2 671 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 GLMPQ8WWB7 406 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 ASB12Q8WXK4 309 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 TWSG1Q9GZX9 223 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 PCED1AQ9H1Q7 454 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 IKZF4Q9H2S9 585 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 SLITRK6Q9H5Y7 841 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 PLEKHA2Q9HB19 425 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 RRP7AQ9Y3A4 280 aaKnown RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 DMRT1Q9Y5R6 373 aa4.49□□□□□ -1.69
VPS8-211ENST00000452140 LRRFIP2Q9Y608 721 aaKnown RBP4.49□□□□□ -1.69
VPS8-211ENST00000452140 C16orf96A6NNT2 1141 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 TARM1B6A8C7 271 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 PRYO14603 147 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 JTBO76095 146 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 SLPIP03973 132 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 SLC3A2P08195 630 aaKnown RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 MATN1P21941 496 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 NDUFS1P28331 727 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 DUSP1P28562 367 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 SLC8A1P32418 973 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 CLK3P49761 638 aaKnown RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 RCAN1P53805 252 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 COL10A1Q03692 680 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 KPNB1Q14974 876 aaKnown RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 LARS2Q15031 903 aaKnown RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 CNGA3Q16281 694 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 ZNF484Q5JVG2 852 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 CC2D1BQ5T0F9 858 aaKnown RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 WDR93Q6P2C0 686 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 LINS1Q8NG48 757 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 SARAFQ96BY9 339 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 RBM17Q96I25 401 aaKnown RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 GPR78Q96P69 363 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 AGAP2Q99490 1192 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 TIMP4Q99727 224 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 HERC2P3Q9BVR0 1158 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 CLPBQ9H078 707 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 PRDM13Q9H4Q3 707 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 ASNSD1Q9NWL6 643 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 BAG5Q9UL15 447 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 B3GNT3Q9Y2A9 372 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 DERAQ9Y315 318 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 HEMK1Q9Y5R4 338 aaPredicted RBP4.48□□□□□ -1.69
VPS8-211ENST00000452140 WNT6Q9Y6F9 365 aa4.48□□□□□ -1.69
VPS8-211ENST00000452140 MBD3L5A6NJ08 208 aaPredicted RBP4.47□□□□□ -1.69
VPS8-211ENST00000452140 CSF1P09603 554 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 LYL1P12980 280 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 CDK7P50613 346 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 SLC37A1P57057 533 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 TLE3Q04726 772 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 DPTQ07507 201 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 TBRG1Q3YBR2 411 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 ANKS1BQ7Z6G8 1248 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 CHSY1Q86X52 802 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 PAF1Q8N7H5 531 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 PNLDC1Q8NA58 520 aaKnown RBP4.47□□□□□ -1.69
VPS8-211ENST00000452140 USP13Q92995 863 aaPredicted RBP4.47□□□□□ -1.69
VPS8-211ENST00000452140 ARRDC3Q96B67 414 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 SDCCAG3Q96C92 435 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 RITA1Q96K30 269 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 TWNKQ96RR1 684 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 IFT80Q9P2H3 777 aaPredicted RBP4.47□□□□□ -1.69
VPS8-211ENST00000452140 DNAJC16Q9Y2G8 782 aa4.47□□□□□ -1.69
VPS8-211ENST00000452140 LRRC3CA6NJW4 275 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 H7C1Q1 480 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 EYA2O00167 538 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 GRM8O00222 908 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 C1QL1O75973 258 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 TFRCP02786 760 aaKnown RBP4.46□□□□□ -1.7
VPS8-211ENST00000452140 ALDOAP04075 364 aaKnown RBP4.46□□□□□ -1.7
VPS8-211ENST00000452140 CYP3A4P08684 503 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 ACP5P13686 325 aa4.46□□□□□ -1.7
VPS8-211ENST00000452140 CPA1P15085 419 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms