RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 H7C0C1 242 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 NDC80O14777 642 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 POLR3GO15318 223 aaPredicted RBP8.54□□□□□ -1.04
NECAP1-202ENST00000450991 MAP3K6O95382 1288 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 IFNB1P01574 187 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 STIP1P31948 543 aaKnown RBP8.54□□□□□ -1.04
NECAP1-202ENST00000450991 CTNNB1P35222 781 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 PPM1AP35813 382 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 ATP5OP48047 213 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 NR2C2P49116 596 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 ZNF844Q08AG5 666 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 SMARCB1Q12824 385 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 TAF10Q12962 218 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 XRCC4Q13426 336 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 MORF4L2Q15014 288 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 TTMPQ5BVD1 217 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 BTBD8Q5XKL5 378 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 B4GALNT4Q76KP1 1039 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 RELL1Q8IUW5 271 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 ZCCHC9Q8N567 271 aaKnown RBP8.54□□□□□ -1.04
NECAP1-202ENST00000450991 FAM71DQ8N9W8 422 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 C2orf15Q8WU43 125 aaKnown RBP8.54□□□□□ -1.04
NECAP1-202ENST00000450991 FBXO32Q969P5 355 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 ARL8AQ96BM9 186 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 PWWP2AQ96N64 755 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 OLFM3Q96PB7 478 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 C17orf80Q9BSJ5 609 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 FOXP3Q9BZS1 431 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 TSPYL1Q9H0U9 437 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 SMOC2Q9H3U7 446 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 MRPL17Q9NRX2 175 aaKnown RBP8.54□□□□□ -1.04
NECAP1-202ENST00000450991 SNX10Q9Y5X0 201 aa8.54□□□□□ -1.04
NECAP1-202ENST00000450991 MTCL1Q9Y4B5 1905 aaKnown RBP8.54□□□□□ -1.04
NECAP1-202ENST00000450991 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CFAP69A5D8W1 941 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 FAM72CH0Y354 149 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 TEX28O15482 410 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 IRAK2O43187 625 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 RIPK2O43353 540 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 TBX18O95935 607 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 YWHAQP27348 245 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 HCAR3P49019 387 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 FAM72AQ5TYM5 149 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 FAM72DQ6L9T8 149 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 TRMT10CQ7L0Y3 403 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 PCGF5Q86SE9 256 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CCDC25Q86WR0 208 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 FAM72BQ86X60 149 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CCDC33Q8N5R6 958 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CPT1BQ92523 772 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 PRCCQ92733 491 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CASP10Q92851 521 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CLP1Q92989 425 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 SPATA17Q96L03 361 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 QKIQ96PU8 341 aaKnown RBP eCLIP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CDC42EP4Q9H3Q1 356 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 FBXO44Q9H4M3 255 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 WDCPQ9H6R7 721 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 TMBIM4Q9HC24 238 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 LRRC4CQ9HCJ2 640 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 ARHGEF38Q9NXL2 777 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 DTLQ9NZJ0 730 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 VPS18Q9P253 973 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 AFF4Q9UHB7 1163 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 SHOC2Q9UQ13 582 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CHD5Q8TDI0 1954 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 SLC38A8A6NNN8 435 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 EEF2KO00418 725 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 DCLK1O15075 740 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 MFSD11O43934 449 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CNPP09543 421 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 RBL1P28749 1068 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 MAGEA10P43363 369 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 NRLP54845 237 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 PAFAH1B3Q15102 231 aaKnown RBP8.53□□□□□ -1.04
NECAP1-202ENST00000450991 ARL13BQ3SXY8 428 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 CEP85LQ5SZL2 805 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 RASIP1Q5U651 963 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 MSANTD2Q6P1R3 559 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 RFX8Q6ZV50 586 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 TMC7Q7Z402 723 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 MON1AQ86VX9 555 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 NAT8LQ8N9F0 302 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 NETO2Q8NC67 525 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 ZNF461Q8TAF7 563 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 LRRN4Q8WUT4 740 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 RNF34Q969K3 372 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 TKTL2Q9H0I9 626 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 ZBP1Q9H171 429 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 GBF1Q92538 1859 aa8.53□□□□□ -1.04
NECAP1-202ENST00000450991 LINC01553A4QN01 128 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 PRRG1O14668 218 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 KCNN4O15554 427 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 CREB3O43889 395 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 ABLIM3O94929 683 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 CXCL14O95715 111 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 SHBGP04278 402 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 DNAJB1P25685 340 aa8.52□□□□□ -1.05
NECAP1-202ENST00000450991 ZNF135P52742 658 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms