RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 USP39Q53GS9 565 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 DCAF6Q58WW2 860 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 MS4A13Q5J8X5 152 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 FKBP15Q5T1M5 1219 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 OTUD1Q5VV17 481 aaPredicted RBP14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 OR6B2Q6IFH4 312 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 CHPFQ8IZ52 775 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 AOPEPQ8N6M6 819 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 FRMD1Q8N878 549 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 SLC20A1Q8WUM9 679 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 NOX5Q96PH1 765 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 PRMT1Q99873 361 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 TPSD1Q9BZJ3 242 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 NUCKS1Q9H1E3 243 aaKnown RBP14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 CACNA2D2Q9NY47 1150 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 INVSQ9Y283 1065 aa14.61□□□□□ -0.07
RTFDC1-204ENST00000449062 NPC1O15118 1278 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 TEX33O43247 280 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 GRAP2O75791 330 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 ALDH1A2O94788 518 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 GFPT2O94808 682 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 EPN2O95208 641 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 LSM8O95777 96 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 MMEP08473 750 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 HOXB2P14652 356 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 BCKDHBP21953 392 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 SCNN1AP37088 669 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 SNX16P57768 344 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 RPS24P62847 133 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 NOMO3P69849 1222 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 CDK17Q00537 523 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 FMO1Q01740 532 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 UBXN1Q04323 297 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 SPEM2Q0P670 501 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 EIF4HQ15056 248 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 KLHL40Q2TBA0 621 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 PLA2G2CQ5R387 149 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 ARTNQ5T4W7 220 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 TAF3Q5VWG9 929 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 ANKS1BQ7Z6G8 1248 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 ZNF677Q86XU0 584 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 XYLT1Q86Y38 959 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 ZDHHC17Q8IUH5 632 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 FIBINQ8TAL6 211 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 IPO4Q8TEX9 1081 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 RLN3Q8WXF3 142 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 SORCS1Q8WY21 1168 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 C18orf8Q96DM3 657 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 PRICKLE1Q96MT3 831 aaPredicted RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 PCDHB18PQ96TA0 734 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 NPY6RQ99463 290 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 NLRC4Q9NPP4 1024 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 RTN4Q9NQC3 1192 aaKnown RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 MBD1Q9UIS9 605 aaPredicted RBP14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 TMEM59LQ9UK28 342 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 GMEB2Q9UKD1 530 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 STON1Q9Y6Q2 735 aa14.6□□□□□ -0.07
RTFDC1-204ENST00000449062 KNL1Q8NG31 2342 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 TCRBV21S2A2A0A5A6 115 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 I6L893 689 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 TBL1XO60907 577 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 TPM2P07951 284 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 TFE3P19532 575 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 CD70P32970 193 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 NOS2P35228 1153 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 MATKP42679 507 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 IL12RB1P42701 662 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 CDR2Q01850 454 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 ZNF234Q14588 700 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 CSRP2Q16527 193 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 PTPRNQ16849 979 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 TRNP1Q6NT89 227 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 BNIPLQ7Z465 357 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 ERICH1Q86X53 443 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 HMGB4Q8WW32 186 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 CPA5Q8WXQ8 436 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 BTN2A3PQ96KV6 586 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 DDX50Q9BQ39 737 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 HINFPQ9BQA5 517 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 NAT10Q9H0A0 1025 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 SEMA4GQ9NTN9 838 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 ABCB8Q9NUT2 735 aa14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 INTS6Q9UL03 887 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-204ENST00000449062 DAB1O75553 588 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 TACR2P21452 398 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 STAT1P42224 750 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 CXCR3P49682 368 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 ZNF165P49910 485 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 PTP4A2Q12974 167 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 C2CD6Q53TS8 623 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 FSCBQ5H9T9 825 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 PMS2CLQ68D20 193 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 SDE2Q6IQ49 451 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 ARCQ7LC44 396 aa14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 METTL3Q86U44 580 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 HJURPQ8NCD3 748 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-204ENST00000449062 ANKRD20A12PQ8NF67 263 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms