RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 UNQ6494/PRO21346Q6UXR6 183 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 Q6ZNB5 142 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 GPRIN1Q7Z2K8 1008 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 MIB1Q86YT6 1006 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 KDF1Q8NAX2 398 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 RBBP8NLQ8NC74 664 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 DEFB124Q8NES8 71 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 ZNF419Q96HQ0 510 aaPredicted RBP14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 SPAG5Q96R06 1193 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 NUP58Q9BVL2 599 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 STK33Q9BYT3 514 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 NAGPAQ9UK23 515 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 CAPN11Q9UMQ6 739 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 FAM170AA1A519 330 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 TMEM8BA6NDV4 472 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 OPHN1O60890 802 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 NDUFS2O75306 463 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 STC2O76061 302 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 SOX5P35711 763 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 ARID5AQ03989 594 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 HNRNPDQ14103 355 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 PPP1R26Q5T8A7 1209 aaPredicted RBP14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 ENOSF1Q7L5Y1 443 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 SCD5Q86SK9 330 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 PIP4P1Q86T03 277 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 METTL3Q86U44 580 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 ARHGAP18Q8N392 663 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 UCMAQ8WVF2 138 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 FOXJ1Q92949 421 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 JAKMIP2Q96AA8 810 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 HEXIM2Q96MH2 286 aaKnown RBP14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 ACOX2Q99424 681 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 ADAM33Q9BZ11 813 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 CAPN10Q9HC96 672 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
PDLIM2-213ENST00000448520 KNL1Q8NG31 2342 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 A0A1W2PQJ5 194 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 ARHGAP33O14559 1287 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 MFAP3LO75121 409 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 SKILP12757 684 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 NDUFV2P19404 249 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 CLCN1P35523 988 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 KRT9P35527 623 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC8A3P57103 927 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 KIAA1211LQ6NV74 962 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 TOGARAM2Q6ZUX3 1019 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 FAM71AQ8IYT1 594 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 DEFB119Q8N690 84 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC4A11Q8NBS3 891 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 TFAP2BQ92481 460 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 MRGPRX1Q96LB2 322 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 ZSWIM1Q9BR11 485 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 SCNM1Q9BWG6 230 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 GTPBP2Q9BX10 602 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 SUSD2Q9UGT4 822 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 CYP8B1Q9UNU6 501 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 CNTN6Q9UQ52 1028 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 LUC7L2Q9Y383 392 aaKnown RBP14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 CFAP47Q6ZTR5 3102 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 ADAMTS9Q9P2N4 1935 aa14.35□□□□□ -0.11
PDLIM2-213ENST00000448520 FAM208BQ5VWN6 2430 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 C1QTNF9BB2RNN3 333 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 H0Y626 953 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 MDM4O15151 490 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 TIMM44O43615 452 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 TRIM16O95361 564 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 PENKP01210 267 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 CYBBP04839 570 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 C1QTNF9P0C862 333 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 GNSP15586 552 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 BRD2P25440 801 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 STAT1P42224 750 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 YWHAEP62258 255 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 ZBED6P86452 979 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC14A1Q13336 389 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 TRIM14Q14142 442 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 STARD3Q14849 445 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 WDR45BQ5MNZ6 344 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC47A2Q86VL8 602 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC41A1Q8IVJ1 513 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 RGL4Q8IZJ4 473 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 TC2NQ8N9U0 490 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 SLC20A1Q8WUM9 679 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 TMEM176AQ96HP8 235 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 DNAAF2Q9NVR5 837 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 CACNA2D2Q9NY47 1150 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 PLK2Q9NYY3 685 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 THAP10Q9P2Z0 257 aaPredicted RBP14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 STRIP2Q9ULQ0 834 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 STON1Q9Y6Q2 735 aa14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 ATXN2Q99700 1313 aaKnown RBP14.34□□□□□ -0.11
PDLIM2-213ENST00000448520 CACNA1GO43497 2377 aa14.33□□□□□ -0.11
PDLIM2-213ENST00000448520 CABIN1Q9Y6J0 2220 aa14.33□□□□□ -0.12
PDLIM2-213ENST00000448520 WASH3PC4AMC7 463 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms