RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TMPRSS4Q9NRS4 437 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 ZNF358Q9NW07 568 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 SNTG2Q9NY99 539 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 DTLQ9NZJ0 730 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 CREB3O43889 395 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 MAGEC1O60732 1142 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 ERVK-10P10266 1014 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 TYK2P29597 1187 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 ARL4AP40617 200 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 POLE2P56282 527 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 AP2B1P63010 937 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 INCA1Q0VD86 236 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 OLIG2Q13516 323 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 PEX6Q13608 980 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 DNAL1Q4LDG9 190 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 RALGPS1Q5JS13 557 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 MOB2Q70IA6 237 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 SLC26A7Q8TE54 656 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 HTR3CQ8WXA8 447 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
SHC1-210ENST00000448116 FAM136AQ96C01 138 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 XPNPEP3Q9NQH7 507 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 PPM1HQ9ULR3 514 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 GCATO75600 419 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 ZMPSTE24O75844 475 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 GNAT1P11488 350 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 RAP1GDS1P52306 607 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 HIC1Q14526 733 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 PIWIL2Q8TC59 973 aaKnown RBP13.29□□□□□ -0.28
SHC1-210ENST00000448116 PPP4R1Q8TF05 950 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 TFB1MQ8WVM0 346 aaKnown RBP13.29□□□□□ -0.28
SHC1-210ENST00000448116 PGBD4Q96DM1 585 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 CCDC106Q9BWC9 280 aa13.29□□□□□ -0.28
SHC1-210ENST00000448116 FAM49AQ9H0Q0 323 aaPredicted RBP13.29□□□□□ -0.28
SHC1-210ENST00000448116 SDR42E2A6NKP2 422 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 USP12O75317 370 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 SERPINA6P08185 405 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 IRX1P78414 480 aaPredicted RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 FOXD4Q12950 439 aaPredicted RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 PDE1CQ14123 709 aaPredicted RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 PPP2R5DQ14738 602 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 KIZQ2M2Z5 673 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 PACS1Q6VY07 963 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 NET1Q7Z628 596 aaPredicted RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 C10orf107Q8IVU9 208 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 SULF1Q8IWU6 871 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 ZNF483Q8TF39 744 aaPredicted RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 SLC35F5Q8WV83 523 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 FGD4Q96M96 766 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 TUBGCP4Q9UGJ1 667 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 FZD9O00144 591 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 MDM4O15151 490 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 SNNO75324 88 aaPredicted RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 SORBS2O94875 1100 aaKnown RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 IL1BP01584 269 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 ALDOAP04075 364 aaKnown RBP13.28□□□□□ -0.28
SHC1-210ENST00000448116 LGALS2P05162 132 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 VAV1P15498 845 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 AFG1LQ8WV93 481 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 PPP1R36Q96LQ0 422 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 VRTNQ9H8Y1 702 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 ACSS2Q9NR19 701 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 DOCK1Q14185 1865 aa13.28□□□□□ -0.28
SHC1-210ENST00000448116 SLC26A2P50443 739 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 WASHC5Q12768 1159 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 ITGA9Q13797 1035 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 NOL9Q5SY16 702 aaKnown RBP13.27□□□□□ -0.28
SHC1-210ENST00000448116 TEDDM1Q5T9Z0 273 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 CMC1Q7Z7K0 106 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 TMEM110Q86TL2 294 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 CCNJLQ8IV13 435 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 SOX13Q9UN79 622 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 C2CD2Q9Y426 696 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 PCNTO95613 3336 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 ADM5C9JUS6 153 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 RNF103O00237 685 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 BIRC5O15392 142 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 PROCP04070 461 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 ZFXP17010 805 aaPredicted RBP13.27□□□□□ -0.28
SHC1-210ENST00000448116 STILQ15468 1287 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 RASSF3Q86WH2 238 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 TNS4Q8IZW8 715 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 PHC3Q8NDX5 983 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 ZNF778Q96MU6 729 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 ZMAT2Q96NC0 199 aaKnown RBP13.27□□□□□ -0.28
SHC1-210ENST00000448116 MAN1C1Q9NR34 630 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 PACSIN3Q9UKS6 424 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 NME7Q9Y5B8 376 aa13.27□□□□□ -0.28
SHC1-210ENST00000448116 PARP14Q460N5 1801 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 CCDC78A2IDD5 438 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 KCNK1O00180 336 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 DPYSL4O14531 572 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 TSPAN1O60635 241 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 GSTA2P09210 222 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 TPSB2P20231 275 aa13.27□□□□□ -0.29
SHC1-210ENST00000448116 PSMB4P28070 264 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms