RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 MAK16Q9BXY0 300 aaKnown RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 SMG9Q9H0W8 520 aaKnown RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 S1PR5Q9H228 398 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 TTC7AQ9ULT0 858 aaPredicted RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 ARHGAP26Q9UNA1 814 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 HS3ST4Q9Y661 456 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 KRT10P13645 584 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 IL4RP24394 825 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 CORO1AP31146 461 aaKnown RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 SLC11A2P49281 568 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 MMRN1Q13201 1228 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 CLUL1Q15846 466 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 LONRF2Q1L5Z9 754 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 KAZNQ674X7 775 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 DENND1CQ8IV53 801 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 C1orf74Q96LT6 269 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 ZSWIM3Q96MP5 696 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 CWC15Q9P013 229 aaKnown RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 RCOR3Q9P2K3 495 aaPredicted RBP20.21■□□□□ 0.83
SGCE-207ENST00000447873 SNX10Q9Y5X0 201 aa20.21■□□□□ 0.83
SGCE-207ENST00000447873 hCG_1818297A0A087WSY0 165 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 FAM72CH0Y354 149 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 H3BRJ5 948 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 GOT1P17174 413 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 PTPN7P35236 360 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 GGCXP38435 758 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 ZNF135P52742 658 aaPredicted RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 MLLT6P55198 1093 aaPredicted RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 ZXDBP98169 803 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 CKAP4Q07065 602 aaKnown RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 TAZQ16635 292 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 ANKRD20A8PQ5CZ79 823 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 MS4A13Q5J8X5 152 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 HABP4Q5JVS0 413 aaKnown RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 ACBD5Q5T8D3 534 aaPredicted RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 FAM72AQ5TYM5 149 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 PIK3R6Q5UE93 754 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 FAM72DQ6L9T8 149 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 GET4Q7L5D6 327 aaPredicted RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 FAM72BQ86X60 149 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 SLC13A5Q86YT5 568 aaPredicted RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 TSC1Q92574 1164 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 AZIN2Q96A70 460 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 RIPOR3Q96MK2 946 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 DCLK3Q9C098 648 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 TDP1Q9NUW8 608 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 SMARCAL1Q9NZC9 954 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 CFAP97Q9P2B7 532 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 LSM7Q9UK45 103 aaKnown RBP20.2■□□□□ 0.82
SGCE-207ENST00000447873 SH3BP1Q9Y3L3 701 aa20.2■□□□□ 0.82
SGCE-207ENST00000447873 LEFTY2O00292 366 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 EEF2KO00418 725 aaKnown RBP20.19■□□□□ 0.82
SGCE-207ENST00000447873 ACSL4O60488 711 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 TJP3O95049 919 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 KLKB1P03952 638 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 TPI1P60174 286 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 SEMA3BQ13214 749 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 ADAT2Q7Z6V5 191 aaKnown RBP20.19■□□□□ 0.82
SGCE-207ENST00000447873 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
SGCE-207ENST00000447873 RFX6Q8HWS3 928 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.19■□□□□ 0.82
SGCE-207ENST00000447873 ADAMTS19Q8TE59 1207 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 FGF13Q92913 245 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 WBP2Q969T9 261 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 MSLNLQ96KJ4 702 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 CSPG4P5Q96PW8 444 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 RNF157Q96PX1 679 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 L2HGDHQ9H9P8 463 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 CCL26Q9Y258 94 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 EFR3BQ9Y2G0 817 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 NUP210Q8TEM1 1887 aaPredicted RBP20.19■□□□□ 0.82
SGCE-207ENST00000447873 BRWD1Q9NSI6 2320 aa20.19■□□□□ 0.82
SGCE-207ENST00000447873 ZNF487B1APH4 448 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 PDE2AO00408 941 aaPredicted RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 DAPK3O43293 454 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 LRIG2O94898 1065 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 MTHFRP42898 656 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 NRG1Q02297 640 aaPredicted RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 CCDC85BQ15834 202 aaPredicted RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 RAP1GAP2Q684P5 730 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 RFX8Q6ZV50 586 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 CHSY1Q86X52 802 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 ARID3BQ8IVW6 561 aaPredicted RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 DEFB123Q8N688 67 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 ZSCAN18Q8TBC5 510 aaPredicted RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 SH3RF2Q8TEC5 729 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 USP13Q92995 863 aaPredicted RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 FAF2Q96CS3 445 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 HERPUD2Q9BSE4 406 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 GDE1Q9NZC3 331 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 STIM2Q9P246 746 aa20.18■□□□□ 0.82
SGCE-207ENST00000447873 AGO1Q9UL18 857 aaKnown RBP20.18■□□□□ 0.82
SGCE-207ENST00000447873 CST8O60676 142 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 FOSL2P15408 326 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 HCAR3P49019 387 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 DYNLT1P63172 113 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 AUHQ13825 339 aaKnown RBP20.17■□□□□ 0.82
SGCE-207ENST00000447873 TFDP2Q14188 446 aa20.17■□□□□ 0.82
SGCE-207ENST00000447873 POTEHQ6S545 545 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms