RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 PLEKHF1Q96S99 279 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 QRSL1Q9H0R6 528 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 C12orf65Q9H3J6 166 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 NOL11Q9H8H0 719 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 PAK6Q9NQU5 681 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 STOX2Q9P2F5 926 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 FBXO40Q9UH90 709 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MED16Q9Y2X0 877 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 AFG3L2Q9Y4W6 797 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SALL1Q9NSC2 1324 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TEX33O43247 280 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 KRT36O76013 467 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MYBL1P10243 752 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UBL4AP11441 157 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CYP2C18P33260 490 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MYL6P60660 151 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RPS3AP61247 264 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 PSMC6P62333 389 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 STK11Q15831 433 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TSHZ3Q63HK5 1081 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 UGT3A1Q6NUS8 523 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 C3orf33Q6P1S2 294 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PLET1Q6UQ28 207 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TRIM72Q6ZMU5 477 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 C16orf62Q7Z3J2 963 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 MRPL10Q7Z7H8 261 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 CCDC71Q8IV32 467 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 LIX1Q8N485 282 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DHRSXQ8N5I4 330 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 POLR1EQ9GZS1 481 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 FAM105AQ9NUU6 356 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NSMCE4AQ9NXX6 385 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ASH2LQ9UBL3 628 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SNX24Q9Y343 169 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ZNF335Q9H4Z2 1342 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 A6NJR5 290 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ARHGEF33A8MVX0 844 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 K7EPI3 171 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 AQP9O43315 295 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TBC1D4O60343 1298 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SUPT7LO94864 414 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SNAP29O95721 258 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC4A1P02730 911 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ATF4P18848 351 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 FASP25445 335 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RPS5P46782 204 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 TXNL4AP83876 142 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 CYP27A1Q02318 531 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 HSF2Q03933 536 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RRP1BQ14684 758 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 RFTN1Q14699 578 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 KSR2Q6VAB6 950 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ATG14Q6ZNE5 492 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 EXD1Q8NHP7 514 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TTC17Q96AE7 1141 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 OXNAD1Q96HP4 312 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 PPP1R10Q96QC0 940 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 FAM49BQ9NUQ9 324 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 TRPM5Q9NZQ8 1165 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 VTI1BQ9UEU0 232 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PCDHB5Q9Y5E4 795 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DMRT2Q9Y5R5 561 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 VWDEQ8N2E2 1590 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NPHP4O75161 1426 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 ACEP12821 1306 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SPDYE16A6NNV3 312 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 E7EWF7 191 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 NOP56O00567 594 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 STX11O75558 287 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RFC4P35249 363 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 VEGFCP49767 419 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GMFBP60983 142 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GSTO1P78417 241 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 EXOSC10Q01780 885 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 MTMR2Q13614 643 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 STARD3Q14849 445 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ARSKQ6UWY0 536 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ILDR2Q71H61 639 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 DHX38Q92620 1227 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 HYLS1Q96M11 299 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 C14orf93Q9H972 538 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 PRM3Q9NNZ6 103 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 CATSPERZQ9NTU4 200 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SNTG2Q9NY99 539 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ABCG2Q9UNQ0 655 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 RAPGEF6Q8TEU7 1601 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GRM8O00222 908 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 AKAP10O43572 662 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SLC2A3P11169 496 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 VARSP26640 1264 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 FOSBP53539 338 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 PTK7Q13308 1070 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ADAM15Q13444 863 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 ZCCHC8Q6NZY4 707 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 ZNF782Q6ZMW2 699 aaPredicted RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 MFSD6Q6ZSS7 791 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 SH3RF1Q7Z6J0 888 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 GPR180Q86V85 440 aa2.99□□□□□ -1.93
CHD9-203ENST00000447540 LRRC47Q8N1G4 583 aaKnown RBP2.99□□□□□ -1.93
CHD9-203ENST00000447540 METTL25Q8N6Q8 603 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms