RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ATP9BO43861 1147 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PAGE2BQ5JRK9 111 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 C6orf183Q5T699 404 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ZNF669Q96BR6 464 aaPredicted RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 DGCR6LQ9BY27 220 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MOSPD1Q9UJG1 213 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 DHRS12A0PJE2 317 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CLDN25C9JDP6 229 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MTSS1O43312 755 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CES3Q6UWW8 571 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ZCCHC23Q6ZST2 131 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 HDHD2Q9H0R4 259 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PACSIN3Q9UKS6 424 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ZC3H4Q9UPT8 1303 aaKnown RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 MYO7AQ13402 2215 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 DENRO43583 198 aaKnown RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 TIMM44O43615 452 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PDE9AO76083 593 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 KCTD8Q6ZWB6 473 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 POLNQ7Z5Q5 900 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 RAB2BQ8WUD1 216 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 FIG4Q92562 907 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 MYDGFQ969H8 173 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ZNF518BQ9C0D4 1074 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 TBC1D22BQ9NU19 505 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 J3QRK9 145 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 RNF103O00237 685 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 NADK2Q4G0N4 442 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CBWD6Q4V339 395 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CBWD3Q5JTY5 395 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CBWD5Q5RIA9 395 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 C16orf62Q7Z3J2 963 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 FBXL8Q96CD0 374 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 NMRAL1Q9HBL8 299 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 IL5RAQ01344 420 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 DENND1BQ6P3S1 775 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PSPC1Q8WXF1 523 aaKnown RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 BIRC8Q96P09 236 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 SEPHS2Q99611 448 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CPNE1Q99829 537 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 VTA1Q9NP79 307 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ZNF221Q9UK13 617 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CRABP2P29373 138 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 KPNA1P52294 538 aaPredicted RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 TRAF3Q13114 568 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 COBLL1Q53SF7 1204 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 TMEM26Q6ZUK4 368 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CHSY1Q86X52 802 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PIWIL2Q8TC59 973 aaKnown RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 PRR23AA6NEV1 266 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 NBNO60934 754 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 BBOX1O75936 387 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 GRIA3P42263 894 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 PGS1Q32NB8 556 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 LIN28AQ9H9Z2 209 aaKnown RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 ENTPD7Q9NQZ7 604 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 COMMD8Q9NX08 183 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 IGSF9Q9P2J2 1179 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 NDUFAF1Q9Y375 327 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CCDC182A6NF36 153 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 SNRPB2P08579 225 aaKnown RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 ERO1BQ86YB8 467 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 C10orf107Q8IVU9 208 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 FBXO28Q9NVF7 368 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 CRNNQ9UBG3 495 aaPredicted RBP8.06□□□□□ -1.12
SMG1-202ENST00000446231 FEM1BQ9UK73 627 aa8.06□□□□□ -1.12
SMG1-202ENST00000446231 ADAMTS12P58397 1594 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TRIM38O00635 465 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CLCN2P51788 898 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 HM13Q8TCT9 377 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 C12orf65Q9H3J6 166 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 MBD2Q9UBB5 411 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ATP6V1HQ9UI12 483 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 FBP2O00757 339 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TNFRSF21O75509 655 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 YWHABP31946 246 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 OR2T34Q8NGX1 318 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 OR2T3Q8NH03 318 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 NCKIPSDQ9NZQ3 722 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 SLC7A8Q9UHI5 535 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 BOLA2-SMG1P6H3BVE0 249 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 FKBP9O95302 570 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 RBP1P09455 135 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 GABRB2P47870 512 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 GRM1Q13255 1194 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TBC1D25Q3MII6 688 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 FKBP9P1Q75LS8 142 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 SETD9Q8NE22 299 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 MCFD2Q8NI22 146 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 DNAJC19Q96DA6 116 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 EHD1Q9H4M9 534 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 COQ10BQ9H8M1 238 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 IMPAD1Q9NX62 359 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 WNT7AO00755 349 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 LCP1P13796 627 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 OSTNP61366 133 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 EFHC2Q5JST6 749 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 VCPIP1Q96JH7 1222 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms